Pairwise Alignments

Query, 520 a.a., ATPase AAA from Pseudomonas simiae WCS417

Subject, 519 a.a., sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

 Score =  942 bits (2434), Expect = 0.0
 Identities = 472/518 (91%), Positives = 495/518 (95%), Gaps = 1/518 (0%)

Query: 1   MRIKVHCQNRIGILRDILNLLVEYGVNVAKGEVGGEHGNAIYLFCPNLVNMQFQALRPQF 60
           MRIKVHCQNRIGILRDILNLLVEYG+NV +GEVGG+HGNAIYL CPNL+N+QFQALRP+F
Sbjct: 1   MRIKVHCQNRIGILRDILNLLVEYGINVLRGEVGGDHGNAIYLHCPNLINLQFQALRPKF 60

Query: 61  EAIAGVFGVKRVGLMPSERRHMELNALLGALEFPVLSIDMGGSIVAANRAAAQLLGVRVD 120
           EAIAGVFGVKRVGLMPSERRHMELNALLGAL+FPVLSIDMGGSIVAANRAAAQLLGVRVD
Sbjct: 61  EAIAGVFGVKRVGLMPSERRHMELNALLGALDFPVLSIDMGGSIVAANRAAAQLLGVRVD 120

Query: 121 EVPGIPLSRYAEDFDLPELVRASKSRINGLRVKVKGDVFLADIAPLQSSEHDDSEAMAGA 180
           EVPG+PL+RY EDFDLPELVRA+KSRINGLR+KVKGDVFLADIAPLQS EHDDSEA+AGA
Sbjct: 121 EVPGMPLARYVEDFDLPELVRANKSRINGLRIKVKGDVFLADIAPLQS-EHDDSEALAGA 179

Query: 181 VLTLHRADRVGERIYNVRKQELRGFDSIFQSSKVMAAVVREARRMAPLDAPLLIEGETGT 240
           VLTLHRADR+GERIYNVRKQELRGFDSIFQSS+VMAAVVREARRMAPLDAPLLIEGETGT
Sbjct: 180 VLTLHRADRIGERIYNVRKQELRGFDSIFQSSRVMAAVVREARRMAPLDAPLLIEGETGT 239

Query: 241 GKELLARACHLASPRGQSPLMALNCAGLPESMAETELFGYGPGAFEGARAEGKLGLLELT 300
           GKELLARACHLASPRGQSPLMALNCAGLPESMAETELFGYGPGAFEGARAEGKLGLLELT
Sbjct: 240 GKELLARACHLASPRGQSPLMALNCAGLPESMAETELFGYGPGAFEGARAEGKLGLLELT 299

Query: 301 AGGTLFLDGVGEMSARLQVKLLRFLQDGCFRRVGSDEEVYLDVRVICATQVDLSELCARG 360
           AGGTLFLDGVGEMS RLQVKLLRFLQDGCFRRVGSDEEVYLDVRVICATQVDLSELCARG
Sbjct: 300 AGGTLFLDGVGEMSPRLQVKLLRFLQDGCFRRVGSDEEVYLDVRVICATQVDLSELCARG 359

Query: 361 EFRQDLYHRLNVLSLHIPPLRECLDGLAPLVDHFLDQASRQIGCPLPKLAPAAMDRLSHY 420
           EFRQDLYHRLNVLSLHIPPLREC+DGL  LV HFLDQASRQIGC +P+LAPAAMD+L  Y
Sbjct: 360 EFRQDLYHRLNVLSLHIPPLRECMDGLEGLVQHFLDQASRQIGCAMPRLAPAAMDKLGQY 419

Query: 421 HWPGNVRQLENVLFQAVSLCEGGTVKVEHIRLPDYGVRQPLGDFSLEGGLEDIVGRFEKA 480
           HWPGNVRQLENVLFQAVSLC+GG VK EHIRLPDYGVRQPLG+FSLEG L  IVGRFEKA
Sbjct: 420 HWPGNVRQLENVLFQAVSLCDGGVVKSEHIRLPDYGVRQPLGEFSLEGDLSQIVGRFEKA 479

Query: 481 VLEALYAEHSSSRQLGKRLGVSHTTIANKLRDYEILKA 518
           VLE+L  E  SSR LGKRLGVSHTTIANKLRDY + K+
Sbjct: 480 VLESLMGEFPSSRALGKRLGVSHTTIANKLRDYSLNKS 517