Pairwise Alignments

Query, 246 a.a., flagellar basal body rod protein FlgF from Pseudomonas simiae WCS417

Subject, 261 a.a., Flagellar basal-body rod protein FlgF from Variovorax sp. SCN45

 Score = 79.7 bits (195), Expect = 5e-20
 Identities = 67/243 (27%), Positives = 114/243 (46%), Gaps = 26/243 (10%)

Query: 1   MDKYLYVAMTGASQNALAQKAHANNLANISTNGFQRDLEQARSMPVFGDSFPAR----AF 56
           M   L +++    Q+    +  + N+AN +T G++R++  +  M   G     R    ++
Sbjct: 1   MSDVLAISLLSMQQDMGRLERISLNMANATTPGYKREVVTSLPMGASGFVDAMRGADASW 60

Query: 57  AMTERPA------------TDFTPGAMIETGRDLDVAVNGDGWMAVQTPDGGEAYVRSAS 104
           + T +PA            TD  P  +  TG+ LDVA+   G+  V T   G AY R  +
Sbjct: 61  SGTAQPASTSVAAAPFMVQTDLRPSTLKTTGQSLDVALANSGFFEVSTR-AGLAYTRQGN 119

Query: 105 MNVDALGVLRAGNGMPIMGNGGPIAVPPQQKIEVGSDGTISIRAMGEGPRVMAEVDRIKL 164
             +D  G L    G P+MG GG I +     + + + G +     G G      V ++K+
Sbjct: 120 WQLDPRGRLVTAKGHPVMGVGGEIVLTRPNPV-IDAVGQVFESRPGGGAEA-TPVAQLKV 177

Query: 165 VQ----PDLKNMNKGLDGTIHTKDGQPAQADANVKLTSGFLQASNVNAVEEMTAVLALSK 220
           V      DL+ M +GL   + T+      ADA++++  GFL+ SNVN+++EM  ++   +
Sbjct: 178 VGFDNGTDLQRMGEGL---VTTQQVPNQLADADIQVRQGFLENSNVNSMQEMAQLIQSMR 234

Query: 221 QFE 223
            FE
Sbjct: 235 HFE 237