Pairwise Alignments

Query, 246 a.a., flagellar basal body rod protein FlgF from Pseudomonas simiae WCS417

Subject, 403 a.a., Flagellar hook protein FlgE from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 45.4 bits (106), Expect = 2e-09
 Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 9/119 (7%)

Query: 8   AMTGASQNALAQKAHANNLANISTNGFQRDLEQARSMPVFGDSFPARAFAMTERPA---T 64
           A++G +  A       NN+AN +T GF+           F D F      +  + A    
Sbjct: 6   AVSGLNAAATNLDVIGNNIANSATYGFKSGTAS------FADMFAGSKVGLGVKVAGITQ 59

Query: 65  DFTPGAMIETGRDLDVAVNGDGWMAVQTPDGGEAYVRSASMNVDALGVLRAGNGMPIMG 123
           DFT G    TGR LDVA++ +G+  +   +G   Y R+    +D    L    GM + G
Sbjct: 60  DFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQLTG 118



 Score = 27.7 bits (60), Expect = 4e-04
 Identities = 13/51 (25%), Positives = 30/51 (58%), Gaps = 3/51 (5%)

Query: 195 KLTSGFLQASNVNAVEEMTAVLALSKQFELHIKMMNSAKEDDQAMTRVMQM 245
           KLT+G L+ASNV+  +E+  ++   + ++ + +   + K  DQ +  ++ +
Sbjct: 355 KLTNGALEASNVDLSKELVNMIVAQRNYQSNAQ---TIKTQDQILNTLVNL 402