Pairwise Alignments

Query, 231 a.a., flagellar basal body L-ring protein from Pseudomonas simiae WCS417

Subject, 232 a.a., flagellar protein of basal-body outer-membrane L ring from Escherichia coli BL21

 Score =  131 bits (329), Expect = 1e-35
 Identities = 87/227 (38%), Positives = 118/227 (51%), Gaps = 17/227 (7%)

Query: 9   ALSGIAVLA--GC--VAPTPKPNDPYYAPVLPRTPLPAAANNGSIYQAGFEQN-----LY 59
           A+S + VL+  GC  +  TP       A  +P  P P A  NGSI+Q+    N     L+
Sbjct: 10  AISSLLVLSLTGCAWIPSTPLVQGATSAQPVPG-PTPVA--NGSIFQSAQPINYGYQPLF 66

Query: 60  SDRKAFRVGDIITITLNERTQASKNANSQVGKTSKAGIGLTSLFGAVPNVNNPLGDGDLS 119
            DR+   +GD +TI L E   ASK++++   +  K   G    F  VP     L  G+  
Sbjct: 67  EDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFG----FDTVPRYLQGLF-GNAR 121

Query: 120 LSAGYSGDRATNGKSAAGQGNSLTGSITVTVADVLPNGIIAVRGEKWMTLNTGDELVRIA 179
                SG    NGK  A   N+ +G++TVTV  VL NG + V GEK + +N G E +R +
Sbjct: 122 ADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRFS 181

Query: 180 GMVRADDISTDNTVPSTRIADARITYSGTGAFADASQPGWFDRFFLS 226
           G+V    IS  NTVPST++ADARI Y G G   +A   GW  RFFL+
Sbjct: 182 GVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLN 228