Pairwise Alignments

Query, 423 a.a., flagellar rod assembly protein FlgJ from Pseudomonas simiae WCS417

Subject, 316 a.a., flagellar assembly peptidoglycan hydrolase FlgJ from Dickeya dianthicola ME23

 Score =  117 bits (294), Expect = 4e-31
 Identities = 84/246 (34%), Positives = 123/246 (50%), Gaps = 17/246 (6%)

Query: 180 ELMNQRRIALPSKLTDRLLA-GIVPNAPVAIDAKSAPLRNSAADDNVVNSTARTFAVPSG 238
           +L + + + L S +  +++  GI  N P    A +AP +            AR  A+PS 
Sbjct: 82  QLSSGKGLGLASVIEKQMMGQGIAGNEP----ASAAPFKPDG-------QLAR--AMPSF 128

Query: 239 RM-QVYGRAVAQPPLAPAKKAFSSQDEFVATMLPMAKAAAARIGVDPKYLVAQAALETGW 297
            + Q+  +A+   P   +    SS D F++ +   A   + + G+    ++AQAALE+GW
Sbjct: 129 VLEQMVRKAMPTLPEKSSSLPMSSTD-FISRLSTPAMLVSQQSGIPHHLIMAQAALESGW 187

Query: 298 GKSVMRAEDGSSSHNLFGIKAGQSWQGGQARAITSEFRDGAMVKETAQFRSYSSYQDSFH 357
           G+  +   DG  SHN+FGIKAG SW G      T+E+  G   K  A FR Y SY ++ +
Sbjct: 188 GQREIPTADGRRSHNIFGIKAGSSWDGPITEVTTTEYEQGVAKKVKAAFRVYGSYLEALN 247

Query: 358 DLVTLLQSNDRYKEVVKSADNPEQFVRELQKAGYATDPAYASKISQIAKTMDSYQNYAAA 417
           D   LL  N RY   V +A   EQ    LQ+AGYATDPAYA K+  + + M +    A  
Sbjct: 248 DYARLLTQNPRYAG-VSAAATAEQAAVALQQAGYATDPAYAKKLVSMIQQMKNSGEKAVQ 306

Query: 418 GATTHL 423
             T  L
Sbjct: 307 AYTRDL 312



 Score = 56.2 bits (134), Expect = 1e-12
 Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 6/87 (6%)

Query: 25  LNQLK--VGDDKNSEGNMRKVAQEFESLFLSEMLKSMRSATEALGKDNPMNTPAAKQYQE 82
           LN LK  V     S   +R VA++ E +F+  M+KSMR   +AL KD   ++   + +  
Sbjct: 17  LNALKRDVSSHPQSREGIRAVAKQLEGVFVQMMMKSMR---DALPKDGIFSSDQTRMFTS 73

Query: 83  MYDQQLAVSMSREGGGIGLADVLMRQM 109
           MYDQQL   +S  G G+GLA V+ +QM
Sbjct: 74  MYDQQLTQQLS-SGKGLGLASVIEKQM 99