Pairwise Alignments

Query, 681 a.a., flagellar hook protein FlgK from Pseudomonas simiae WCS417

Subject, 458 a.a., Flagellar hook-associated protein FlgK from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  145 bits (366), Expect = 4e-39
 Identities = 103/329 (31%), Positives = 181/329 (55%), Gaps = 11/329 (3%)

Query: 1   MSLLSIGMSGLNASQGALSVLSNNIANANTSGYSRQQTTQSASASNPYGGVFIGSGTTLA 60
           M++    +SG  A+Q AL+  S+NIAN  T G++RQ    +A      G    G G ++ 
Sbjct: 1   MTIHYTALSGALAAQTALAAASHNIANVMTPGFTRQGALFAAVGPFKGGVAATGGGVSVP 60

Query: 61  DVRRVYNEFLDAA-YQNSTALN--NDAKAYSSQASAIDKTLSDKTTGMSSVLSAFFAAVQ 117
            + R  + + +   +Q+++ L   N ++ Y  Q   +++ + D  + ++S L  FF A+ 
Sbjct: 61  ALLRFSDGYKNMQMWQSNSELGRYNTSQPYMRQ---LEQVMGDDGSSLNSGLDVFFNALN 117

Query: 118 TSAANPSDVSARQVLLTSAQTLSNRFNSISTQLNQQKESINGQLKTMSDQVNQLTSSIAS 177
            ++ +P+    RQ ++TSA+ L+ RF +++  LN Q+ S+  Q      QVN L++ IA 
Sbjct: 118 AASVDPTSAPLRQQVITSAEALAQRFGNLNQVLNNQRASVAQQRTATVAQVNSLSAEIAD 177

Query: 178 LNKQITQAQGSSNSAPANLLDARNEAVRSLNELVGVTAVEK-NGVFSVSTGTGQSLVLGD 236
           LN++I  A  ++   P++L+DAR+  + +L+ LVG+  VE+ +G  SVS  +G  LV G 
Sbjct: 178 LNEKIA-ATRATGINPSSLMDARDLKIDALSNLVGLQVVEQADGSASVSLRSGVPLVAGS 236

Query: 237 QSNSISAVPSSSDPSQYTIQLNAGGGTSVDMGNVLSGGSIGGLLRYRSDVLMPAINDLGR 296
            + ++S V ++ D SQ      A    +V  GN+  GG +GGL  +   VL P I+D+  
Sbjct: 237 LAATLSTV-NNPDGSQTLKLAFASESFTVTNGNL--GGQLGGLDEFERTVLKPVIDDVAA 293

Query: 297 IAIVTADTINSQLGQGVDLNGDFGSSLFK 325
           +A   A  +N+Q+  G  ++G  G+ LF+
Sbjct: 294 LAEEIATRVNTQMAVGFAMDGTPGTDLFQ 322



 Score = 46.6 bits (109), Expect = 3e-09
 Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 12/139 (8%)

Query: 547 FKFDTAVGGAPAD-----GDSTTFSFNASGKSDNRNAQALLDLQTKATVGLADGSGGGVS 601
           F+FD A  G         G++  FS + +   ++ N QAL+ L+ +    L   S G V 
Sbjct: 321 FQFDAASTGLLKVVDGLLGENLAFSSDPTKPGNSDNLQALIGLRDQP---LTMPSLGTVR 377

Query: 602 LVAANSRLVSTVGAK--AASGITDTTATGALLKANQDARNSVSQVNLDEEAGDMIKFQQY 659
           L    +++V  +G +   A    DT  T  +    +++  S S VN DEEA +++++QQ 
Sbjct: 378 LGDVYTQIVGRLGTQNQQARAAHDTAKT--VRNQAEESWKSTSGVNTDEEAINIVQYQQM 435

Query: 660 YTASSQIIKAAQETFSTLI 678
           Y A+ +++  + E F T +
Sbjct: 436 YQANMKVLAVSNELFDTTL 454