Pairwise Alignments

Query, 681 a.a., flagellar hook protein FlgK from Pseudomonas simiae WCS417

Subject, 465 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 73.2 bits (178), Expect = 3e-17
 Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 9/233 (3%)

Query: 4   LSIGMSGLNASQGALSVLSNNIANANTSGYSRQQTTQSASASNPYGGVFIGSGTTLADVR 63
           L+  +SGL  +Q   +++S+N+ANA T+GY R+    SA  +   G     +G  +  V 
Sbjct: 7   LTSALSGLRTTQQQAAMVSHNLANATTAGYVRRDLDLSAVTTAGRG-----AGVRVDAVA 61

Query: 64  RVYNEFL--DAAYQNSTALNNDAKAYSSQASAIDKTLSDKTTGMSSVLSAFFAAVQTSAA 121
           R  +E L  DA ++ S     +A+A +    A+          +S+ LS    A      
Sbjct: 62  RKVDELLIRDARFETSRYSGQEARASALADYALVLGQPQDEKSVSTQLSKLQQAFSRLHD 121

Query: 122 NPSDVSARQVLLTSAQTLSNRFNSISTQLNQQKESINGQLKTMSDQVNQLTSSIASLNKQ 181
            P+D +AR  +++ A  L+   N  +      ++   G+L+T  D VN     I+ LN +
Sbjct: 122 MPNDDAARNAVVSQAVALAGGLNRAAEAAQTVQDDARGRLQTSVDTVNTSLQRISDLNGK 181

Query: 182 ITQAQGSSNSAPANLLDARNEAVRSLNELVGV-TAVEKNGVFSVSTGTGQSLV 233
           I   +     A  +L D R+  +  +++ +G+ T   ++G   V T  GQ+L+
Sbjct: 182 IATLETRGGDA-GDLRDQRDRLLDQVSQEIGIRTYSREDGQVVVMTRNGQTLL 233



 Score = 28.9 bits (63), Expect = 6e-04
 Identities = 13/44 (29%), Positives = 25/44 (56%)

Query: 635 QDARNSVSQVNLDEEAGDMIKFQQYYTASSQIIKAAQETFSTLI 678
           + AR +   VN+D+E   ++  +Q Y AS+Q+++ A      L+
Sbjct: 418 ETARINRDGVNIDDEMQKLLLIEQSYGASAQVVQVAGRMIDILL 461