Pairwise Alignments

Query, 441 a.a., pilus assembly protein PilQ from Pseudomonas simiae WCS417

Subject, 694 a.a., Type IV pilus biogenesis protein PilQ from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  340 bits (871), Expect = 1e-97
 Identities = 194/434 (44%), Positives = 271/434 (62%), Gaps = 27/434 (6%)

Query: 25  YTGDKLSLNFQSIELRTALQQIADVAGLNLVASDDVQGSITLRLKDVSWDQALDLVLQAK 84
           Y+G+KLSLNFQ+IE+R+ LQ IAD    N+V SD V G++TLRLKDV WDQALD++LQAK
Sbjct: 266 YSGEKLSLNFQNIEVRSLLQVIADFTNFNIVTSDSVTGAVTLRLKDVPWDQALDIILQAK 325

Query: 85  GLDKRVKAGVLLVAPAEELAARELLTLESRKQMAELAPLRRELLQVNYAKAADLAKLFQS 144
           GL  R    VL +AP +E+AARE   LES+  +  L  LR +  Q+NYAKAAD+A    S
Sbjct: 326 GLGMRKSGNVLWIAPKDEIAAREKQELESKVSIESLETLRTQGFQMNYAKAADIATQLTS 385

Query: 145 VTGLEG-------VTDERGSVAVDDRTNNIIAYQTVERLEELRRIVAQLDIPVRQVMIEA 197
            TG  G       +  +RGSV  + RTN +       RLE+++ ++ +LDIP+RQVMIEA
Sbjct: 386 -TGSGGSGSTSARILSDRGSVISEPRTNQLFVTDIASRLEQVQELIRKLDIPIRQVMIEA 444

Query: 198 RIVEANVDYDKSLGARWGGRLN------------RGNWGA--GGIAKPPPEGAAPPENPP 243
           RIVEA+  + KSLG R GG +             +GN+G+  G     P   +AP  N P
Sbjct: 445 RIVEADDTFGKSLGVRLGGGVRGFNAGSANGNPIQGNFGSNYGAATTGPTLTSAPFVNLP 504

Query: 244 PSPFVDLGSLTGTSGLGIAYITDNLLLDLELTAMEKTGNGEIVSQPKVVTSDKETARILK 303
            +P     +   +  L +   + +  L LE++A+E  G G IVS P+VVT+D+  A I +
Sbjct: 505 ANPST---AQAASFALSLFNPSASRFLSLEISALESDGKGRIVSSPRVVTADQVKALIEQ 561

Query: 304 GTEIPYQESSSSGATSVSFKEASLSLEVTPQITPDDRVIMEVKVTKDEPDYLNKLNDVPP 363
           GTE PYQ ++SSGAT+++F++A+L LEVTPQITP+  +I+++ + KD         D   
Sbjct: 562 GTEFPYQTATSSGATAIAFRKANLKLEVTPQITPEGNIILDLDINKDSRG--ESTPDGIA 619

Query: 364 IKKNEVNAKVLVKDGETIVIGGVFSNTQSKVVDKVPFLGDVPYLGRLFRRDVLAEKKSEL 423
           I    V  +VLV++G T+VIGG+F  T+   V+KVP LGD+P +G LF+       KSEL
Sbjct: 620 INTKHVQTQVLVENGGTVVIGGIFEQTERDEVNKVPLLGDLPAVGNLFKSRNRIANKSEL 679

Query: 424 LVFLTPRIMNNQAI 437
           L+F+TPR++   AI
Sbjct: 680 LIFITPRVLGRSAI 693