Pairwise Alignments

Query, 491 a.a., ATPase AAA from Pseudomonas simiae WCS417

Subject, 474 a.a., sigma-54-dependent Fis family transcriptional regulator from Rhodanobacter sp000427505 FW510-R12

 Score =  390 bits (1002), Expect = e-113
 Identities = 227/481 (47%), Positives = 300/481 (62%), Gaps = 27/481 (5%)

Query: 8   LLIDDDSVRRRDLAVILNFLG---EENLPCGSHDWQQAVSSLSSSREVICVLIGTVNAPG 64
           L+I+ D  R   +   L+FLG   +    C + D         ++     V +G+V    
Sbjct: 7   LVIESDETRVDSVLSALHFLGYRPQHGAACAAVD--------EATHAWRAVYVGSVADAA 58

Query: 65  AVLGLLKTLSTWDEFLPVLLIGD---ISSVELPEDQRRRVLSTLEMPPSYSKLLDSLHRA 121
                   L      +PVLL  D   +             ++TLE P  Y K+      A
Sbjct: 59  EAERQFALLGAAASHVPVLLAADSPWLDRFGAASSTFATRMATLEFPLRYEKM------A 112

Query: 122 QVYREMYDQARERGRHREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGKE 181
           +  R +Y  AR  G       F   VG +  +  V  +++QVA  D++VL+LGESGTGKE
Sbjct: 113 EAMRNIY--ARLLGGQSGALRF---VGNAAPMLRVNALIRQVAPFDSTVLVLGESGTGKE 167

Query: 182 VVARNLHYHSKRRDGPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGGT 241
           +VAR +H HS RRD PFV +NCGAIPAELLESELFGHEKG+FTGAI++R GRFE+A GGT
Sbjct: 168 MVARAIHAHSPRRDKPFVAINCGAIPAELLESELFGHEKGSFTGAISARKGRFEMAEGGT 227

Query: 242 LFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSVDVRIIAATHKNLESMIEVGSFRE 301
           LFLDE+GDM LPMQVKLLRVLQER +ERVG +KT   DVRI+AATH+NLE  I    FRE
Sbjct: 228 LFLDEVGDMSLPMQVKLLRVLQERAYERVGGSKTLRCDVRIVAATHRNLEESIASDRFRE 287

Query: 302 DLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHGWPGN 361
           DL+YRL+VFP+E+  LRER++D+P+L+ E   R+     G +RF+++A+ SLC H WPGN
Sbjct: 288 DLFYRLSVFPLELPSLRERLDDLPVLIAEFNQRLARRGLGVVRFSASAMQSLCAHAWPGN 347

Query: 362 VRELANLVERMAIMHPYGVIGVVELPKKFRYVDDEDEQLVDSLRTDMEERVAIN--GHTP 419
           VREL+NLVERMAI+ P+G +   +LP K+R     DE    +L   ME+ +  +     P
Sbjct: 348 VRELSNLVERMAILFPHGEVRSSDLPTKYRGQQAVDEVHGAALLALMEDELPPSEAAVQP 407

Query: 420 DFGSTAMLPPEGLDLKDYLGNLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYG 479
              +   LP +GLDLKD+L ++E GLI+QALD   G+VA AA  L ++RTTLVEK+RKYG
Sbjct: 408 VAETLRTLPEQGLDLKDHLADIEVGLIRQALDATGGVVAHAARLLHMQRTTLVEKLRKYG 467

Query: 480 M 480
           +
Sbjct: 468 L 468