Pairwise Alignments

Query, 491 a.a., ATPase AAA from Pseudomonas simiae WCS417

Subject, 351 a.a., DNA-binding transcriptional activator HyfR from Escherichia coli ECOR38

 Score =  273 bits (697), Expect = 9e-78
 Identities = 157/343 (45%), Positives = 219/343 (63%), Gaps = 25/343 (7%)

Query: 146 LVGTSRAIQHVRQMMQQVADTDASVLILGESGTGKEVVARNLHYHSKRRDGPFVPVNCGA 205
           ++  S+A++ + Q +  VA +D++VLI GE+GTGKEV+AR +H  S RRD P V +NC A
Sbjct: 28  IIYQSQAMEDLLQQVDIVAKSDSTVLICGETGTGKEVIARAIHQLSPRRDKPLVKINCAA 87

Query: 206 IPAELLESELFGHEKGAFTGAITSRAGRFELANGGTLFLDEIGDMPLPMQVKLLRVLQER 265
           IPA LLESELFGH+KGAFTGAI +  GRFE+A+GGTLFLDEIGD+PL +Q KLLRVLQER
Sbjct: 88  IPASLLESELFGHDKGAFTGAINTHRGRFEIADGGTLFLDEIGDLPLELQPKLLRVLQER 147

Query: 266 TFERVGSNKTQSVDVRIIAATHKNLESMIEVGSFREDLYYRLNVFPIEMAPLRERVEDIP 325
             ER+G ++T  V+VR+IAAT+++L  M+E   FR DL+YRLNVFP+E+ PLR+R EDIP
Sbjct: 148 EIERLGGSRTIPVNVRVIAATNRDLWQMVEDRQFRSDLFYRLNVFPLELPPLRDRPEDIP 207

Query: 326 LLMNELISRM-EHEKRGSIRFNSAAIMSLCRHGWPGNVRELANLVERMAIMHPYGVIGVV 384
           LL      +M  H  R      + A+  L    WPGNVREL N++ER  ++     + + 
Sbjct: 208 LLAKHFTQKMARHMNRAIDAIPTEALRQLMSWDWPGNVRELENVIERAVLLTRGNSLNLH 267

Query: 385 ELPKKFRYVDDEDEQLVDSLRTDMEERVAINGHTPDFGSTAMLPPEGLDLKDYLGNLEQG 444
              ++ R +   +E    +LR+ M +   ++  TP+                     E+ 
Sbjct: 268 LNVRQSRLLPTLNED--SALRSSMVQ--LLHPTTPENDEE-----------------ERQ 306

Query: 445 LIQQALDDANGIVA---RAAERLRIRRTTLVEKMRKYGMSRKE 484
            I Q L + NGIVA    AA RL ++RTTL+ +M++ G+S +E
Sbjct: 307 RIVQVLRETNGIVAGPRGAATRLGMKRTTLLSRMQRLGISVRE 349