Pairwise Alignments

Query, 458 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 478 a.a., nitrogen regulation protein NR(I) from Pseudomonas simiae WCS417

 Score =  285 bits (729), Expect = 2e-81
 Identities = 169/465 (36%), Positives = 260/465 (55%), Gaps = 20/465 (4%)

Query: 5   VLLVEDDRALREALADTLLLAGHDYRAVGSAEAALEAVEQESFSLVVSDVNMPGMDGHQL 64
           V +V+DDR++R  L   L   G   ++  SA+  +  + ++   +++SD+ MPG  G  L
Sbjct: 7   VWIVDDDRSIRWVLEKALQQEGMTTQSFDSADGVMSRLARQQPDVIISDIRMPGASGLDL 66

Query: 65  LGLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALIELVVRHALGVIPP 124
           L  +R + P+LPV++MTAH  ++ AV + + GA +YL KPF+    + LV R        
Sbjct: 67  LARIREQHPRLPVIIMTAHSDLDSAVASYQGGAFEYLPKPFDVDEAVALVKRANQHAQEQ 126

Query: 125 SDGEGPIAFE---------PASAQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQS 175
            + E P A           PA  ++     R++ S+ TVLI+GESGTGKE++A  +H+ S
Sbjct: 127 QNQEAPPALTRTPEIIGEAPAMQEVFRAIGRLSHSNITVLINGESGTGKELVAHALHRHS 186

Query: 176 TRAKQPFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMP 235
            RA  PFIA+N AAIP +++E+ LFGHEKG+FTGA   + G+FEQADGGT+ LDEI +MP
Sbjct: 187 PRAASPFIALNMAAIPKDLMESELFGHEKGAFTGAANLRRGRFEQADGGTLFLDEIGDMP 246

Query: 236 LGLQAKLLRVLQEREVERVGARKPIQLDIRVVATTNRDLAGEVAAGRFREDLFYRLSVFP 295
              Q +LLRVL + E  RVG   P+++D+R++A T+++L   V AG+FREDLF+RL+V  
Sbjct: 247 ADTQTRLLRVLADGEFYRVGGHTPVKVDVRIIAATHQNLETLVHAGKFREDLFHRLNVIR 306

Query: 296 LAWRPLRERPADIIPLAERLLNNHVKKMKHAQAGLSAEAQACLIAYPWPGNVRELDNAIQ 355
           +    + +R  DI  LA   L+   +++      L +E +  L   PWPGNVR+L+N  +
Sbjct: 307 IHIPRMSDRREDIPTLARHFLSRAAQELAVEPKLLKSETEEYLKNLPWPGNVRQLENTCR 366

Query: 356 RALILQQGGLIQPQDF---CLAMGSGAAPLPTLAP-----TPVVVEAETAGALGDDLRRR 407
              ++  G  +   D     L++   +AP+              +    +  L   +   
Sbjct: 367 WITVMASGREVHISDLPPELLSLPQDSAPVTNWEQALRQWADQALARGQSNLLDSAVPAF 426

Query: 408 EFQMIIDTLRSERGRRKEAAERLGISPRTLRYKLAQMRDAGMDVE 452
           E  MI   L+   GRR++AA  LG    TL  K+   ++ GM V+
Sbjct: 427 ERIMIETALKHTAGRRRDAAVLLGWGRNTLTRKI---KELGMKVD 468