Pairwise Alignments

Query, 458 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 483 a.a., sigma-54 dependent transcriptional regulator from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  306 bits (784), Expect = 1e-87
 Identities = 193/491 (39%), Positives = 276/491 (56%), Gaps = 51/491 (10%)

Query: 1   MAIKVLLVEDDRALREALADTLLLAGHDYRAVGSAEAALEAVEQES----FSLVVSDVNM 56
           MA  +L+V+DD   R  +   L     D  AV  A +  EA+++ +      L++ D+ M
Sbjct: 1   MAKTILVVDDDPTQRRLIQAVL---ERDGNAVVHAASGGEAIDRMTRGGGADLILLDMVM 57

Query: 57  PGMDGHQLLGLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALIELVVR 116
           P M G + L  LR+     PV+++TA+G ++  V AM+ GA D+ VKP  P+ L+ + VR
Sbjct: 58  PEMSGLECLAELRSAGINEPVIVLTANGGIDMVVKAMQAGAQDFFVKPVGPERLL-VGVR 116

Query: 117 HALGV--IPPSDG------EGPIAFE------PASAQLLELAARVARSDSTVLISGESGT 162
           +A+ +  +    G      +G  +F+      P    +  L AR A+S   VLI+GESG 
Sbjct: 117 NAMQMKRLTAEVGRLTKRVQGRTSFDDIVGDSPPMRMVKALGARAAKSSIPVLITGESGV 176

Query: 163 GKEVLARYIHQQSTRAKQPFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQAD 222
           GKEV+AR +H  S RA +PF+A+NC A+P N++E+ LFGHEKG+FTGA+    GKF +AD
Sbjct: 177 GKEVIARALHGASDRAGKPFVAVNCGALPANLIESILFGHEKGAFTGAVDKTLGKFREAD 236

Query: 223 GGTILLDEISEMPLGLQAKLLRVLQEREVERVGARKPIQLDIRVVATTNRDLAGEVAAGR 282
           GGT+ LDEI E+PL +Q KLLR LQE E++ VG ++P+++D+R+V+ TNRD A +V  G 
Sbjct: 237 GGTLFLDEIGELPLDMQVKLLRALQEGEIDPVGGKRPVKIDVRIVSATNRDPAQQVKDGA 296

Query: 283 FREDLFYRLSVFPLAWRPLRERPADIIPLAERLLNNHVKKMKHAQAGLSAEAQACLIAYP 342
           FREDLFYRL+VFP+    LR+R  DI PL +  +     +     AG + E  A L  + 
Sbjct: 297 FREDLFYRLNVFPIEAPSLRDRREDIAPLVDHFIARFNAEEGKRIAGCAPETLALLQGFD 356

Query: 343 WPGNVRELDNAIQRALILQQGGLIQPQDFCLAMGSGAAPLPTLAPTPVVVEAETAGALGD 402
           WPGNVR+L+NA+ RA++L     +QP DF  A+   AAP+P   P  V   A  AGA  D
Sbjct: 357 WPGNVRQLENAVFRAIVLADAPFLQPHDF-PAISGVAAPMPDAQPLQV---ATAAGAQTD 412

Query: 403 -------------------DLRRREFQMIIDTLRSERGRRKEAAERLGISPRTLRYKL-- 441
                               L   E  +I   +    G   E A RLGI   TL  K+  
Sbjct: 413 AAAQVDQPIRILDERGHLRTLEDIERDLIQHAIEVYAGHMSEIARRLGIGRSTLYRKVRE 472

Query: 442 ----AQMRDAG 448
                Q+++AG
Sbjct: 473 QGLEGQLKEAG 483