Pairwise Alignments

Query, 322 a.a., flagellar motor switch protein FliM from Pseudomonas simiae WCS417

Subject, 322 a.a., flagellar synthesis, switching and energizing component from Pseudomonas putida KT2440

 Score =  597 bits (1539), Expect = e-175
 Identities = 293/322 (90%), Positives = 315/322 (97%)

Query: 1   MAVQDLLSQDEIDALLHGVDDGLVQTEMAAEPGSVKSYDLTSQDRIVRGRMPTLEMINER 60
           MAVQDLLSQDEIDALLHGVDDGLVQTE A+EPGS+KSYDLTSQDRIVRGRMPTLEMINER
Sbjct: 1   MAVQDLLSQDEIDALLHGVDDGLVQTESASEPGSIKSYDLTSQDRIVRGRMPTLEMINER 60

Query: 61  FARYTRISMFNMLRRSADVAVGGVQVMKFGEYVHSLYVPTSLNLVKIKPLRGTALFILDA 120
           FARYTRISMFN+LRRSADVAVGGVQVMKFGEYVHSLYVPTSLNLVKIKPLRGT+LFILDA
Sbjct: 61  FARYTRISMFNLLRRSADVAVGGVQVMKFGEYVHSLYVPTSLNLVKIKPLRGTSLFILDA 120

Query: 121 KLVFKLVDNFFGGDGRHAKIEGREFTPTELRVVRMVLEQAFIDLKEAWQAIMEVNFEYIN 180
           KLVFKLVDNFFGGDGRHAKIEGREFTPTELRVVRMVL+Q F+DLKEAWQAIM V+FEY+N
Sbjct: 121 KLVFKLVDNFFGGDGRHAKIEGREFTPTELRVVRMVLDQCFVDLKEAWQAIMPVSFEYMN 180

Query: 181 SEVNPAMANIVGPSEAIVVSTFHIELDGGGGDLHVTMPYSMIEPVREMLDAGFQSDLDDQ 240
           SEVNPAMANIVGPSEA+VVSTFHIELDGGGGDLHVTMPYSMIEPVREMLDAGFQSDLDDQ
Sbjct: 181 SEVNPAMANIVGPSEAVVVSTFHIELDGGGGDLHVTMPYSMIEPVREMLDAGFQSDLDDQ 240

Query: 241 DERWVKALREDLLDVDVPLSATVARRQLRLRDILHMQPGDIIPVELPEEMIMRANGVPSF 300
           DERWVKALRED+LDV VP++ATVARRQL+LRDILHMQPGD+IPVELPE +++RANGVP+F
Sbjct: 241 DERWVKALREDVLDVAVPMTATVARRQLKLRDILHMQPGDVIPVELPEHLVLRANGVPAF 300

Query: 301 KVKLGSHKGNLALQVVEPINRR 322
           K +LGSHKGNLALQ+++PI RR
Sbjct: 301 KARLGSHKGNLALQIIDPIERR 322