Pairwise Alignments

Query, 820 a.a., peptidase from Pseudomonas simiae WCS417

Subject, 774 a.a., penicillin-binding protein from Pseudomonas simiae WCS417

 Score =  150 bits (378), Expect = 3e-40
 Identities = 85/260 (32%), Positives = 142/260 (54%), Gaps = 8/260 (3%)

Query: 67  RTPIRFADIPPNFISALLSAEDDNFANHYGVDPSSLVRAATQLVKSGHIQSGGSTITMQV 126
           R  I+   +PP  +  L++ ED +F +H+GV P S+ RA       G +  GGST+T Q+
Sbjct: 168 RILIKLDQVPPYLLETLVAVEDRDFYHHWGVSPKSIARAVWVNTSGGKMTQGGSTLTQQL 227

Query: 127 AKNFFLTSERSFSRKATEILLALQIERQLTKDEILELYVNKIYLG----NRAYGIEAASQ 182
            KNF+LT+ERS +RK TE ++A+ +E   +K EILE Y+N++++G       +G   ASQ
Sbjct: 228 VKNFYLTNERSLTRKLTEAMMAMLLELHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQ 287

Query: 183 VYYGKSIRDASLAQMAMIAGLPKAPSRFNPLANPARSKERRDWILGRMYKLGKIDQAAYE 242
            ++G+ + +  L Q+A++ G+ K PS +NP  NP R+ ERR+ +L  + + G        
Sbjct: 288 FFFGQPLSELKLHQVALLVGMVKGPSYYNPRRNPERALERRNLVLDVLEQQGVATAEQVA 347

Query: 243 SAIAEPLNASYHVPTPEVNAPYIAEMARAEMVGRYGSEAYT-EGFRVTTTVPSNLQEIAN 301
           +A   PL  +      + + P   ++ + ++   Y  E  T EG R+ T+    LQ  A 
Sbjct: 348 AAKKMPLGVTTRGKLADSSFPGFIDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAE 407

Query: 302 DSVHSGLITYDQRHGYRGPE 321
            SV+    T+ +  G +G +
Sbjct: 408 ASVND---TFKRLTGRKGSD 424



 Score =  149 bits (375), Expect = 8e-40
 Identities = 109/403 (27%), Positives = 183/403 (45%), Gaps = 68/403 (16%)

Query: 422 QGALVSLDPQNGAIRALVGGFAFEQSNYNRATQAKRQPGSSFKPFIYSAALD--NGYTAA 479
           + A+V  +P+ G ++A++G      + +NRA  A R  GS  KP +Y  AL+  + YT  
Sbjct: 427 EAAMVVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSLVKPAVYLTALEKPSKYTLT 486

Query: 480 SLVNDAPIVFVDEYLDKVWRPKNDTNTFLGPIRIREALYKSRNLVSIRLLQAMGVGKTID 539
           S ++D P+  V     +VW P+N      G + + + +  S N+ + RL   +GV   + 
Sbjct: 487 SWLSDDPLS-VKGGDGQVWTPQNFDRRSHGTVFLYQGIAHSYNISTSRLGLEVGVPNVLK 545

Query: 540 YMTRFGFSKSDLPPNLSLALGTATLTPMEIATGWSTFANGGYKIAPYLIDKIESRNGDTL 599
            + R G ++ + P   S+ LG   +TPME+AT + T ANGG+      I  + +  G+ L
Sbjct: 546 TIARLGVTR-EFPAFPSILLGAGAMTPMEVATMYQTLANGGFNTPMRGIRSVLTAEGEPL 604

Query: 600 FTANPPRVPGDVVNGVAATDGLAAPSNGGITIEPAPGTTPATNAAATEPQTPAVAERIVD 659
                                                            + P   ++  D
Sbjct: 605 ------------------------------------------------KRYPFQIQQRFD 616

Query: 660 GRTTYILNSILEDVIKKGTGRRALAL--GRPDIAGKTGTTNESKDAWFSGYNADYVTTVW 717
             + Y++ + ++ V+++GTGR   ++      +AGKTGT+N+S+D+WF+G+  D +  VW
Sbjct: 617 AGSIYLIQNAMQRVMREGTGRSVYSVLPANLTLAGKTGTSNDSRDSWFAGFGQDVLAVVW 676

Query: 718 TGYDQPESLGRREF-GGTVALPIWMSYMGAALKDKPPHTQPEPEGILSLRIDPVSGRAAS 776
            G D     G+  F G T AL +W S+M  A  D  P   P+P+ I+   IDP +G+ + 
Sbjct: 677 LGRDDN---GKTPFTGATGALQVWTSFMRKA--DPLPLNMPQPDNIVQAWIDPHTGQGSD 731

Query: 777 PSTPNA-YFELFKSEDTPPSVNELGNGVVPGSPLPADEAAPID 818
            + P A      +  + PP       G   G   PAD  + +D
Sbjct: 732 ANCPGAVQMPYIRGSEPPP-------GAACGGSAPADAESVMD 767