Pairwise Alignments

Query, 820 a.a., peptidase from Pseudomonas simiae WCS417

Subject, 773 a.a., transglycosylase/transpeptidase from Pseudomonas putida KT2440

 Score =  147 bits (372), Expect = 2e-39
 Identities = 90/287 (31%), Positives = 152/287 (52%), Gaps = 10/287 (3%)

Query: 67  RTPIRFADIPPNFISALLSAEDDNFANHYGVDPSSLVRAATQLVKSGHIQSGGSTITMQV 126
           R  I+   +P   +  L++ ED  F +H+GV P S+VRA      SG ++ GGST+T Q+
Sbjct: 168 RILIKIDQVPKYLLETLVATEDREFYSHFGVSPKSIVRAMWVNTSSGSMRQGGSTLTQQL 227

Query: 127 AKNFFLTSERSFSRKATEILLALQIERQLTKDEILELYVNKIYLG----NRAYGIEAASQ 182
            KNF+L+SERS SRK TE ++A+ +E    K EILE Y+N++++G       +G   ASQ
Sbjct: 228 VKNFYLSSERSLSRKLTEAMMAVLLELHYDKREILEAYLNEVFVGQDGQRAVHGFGLASQ 287

Query: 183 VYYGKSIRDASLAQMAMIAGLPKAPSRFNPLANPARSKERRDWILGRMYKLGKIDQAAYE 242
            ++ + + +  L Q+A++ G+ K PS +NP  +P R+  RR+ +L  + + G   QA  +
Sbjct: 288 FFFSQPLSELKLHQIALLVGMVKGPSYYNPRRHPERALARRNLVLDLVAEQGVASQAEVD 347

Query: 243 SAIAEPLNASYHVPTPEVNAPYIAEMARAEMVGRYGSEAYT-EGFRVTTTVPSNLQEIAN 301
           +A   PL  +      + + P   ++ + ++   Y  E  T EG R+ T+    LQ  A 
Sbjct: 348 AAKKMPLGVTKRGSLADSSFPAFLDLVKRQLRQDYRDEDLTEEGLRIFTSFDPILQMKAE 407

Query: 302 DSVHSGLITYDQRHGYRGPESRLPGKTLSAWTTELGKQRAISGLEPA 348
            S+     T+ +  G +G +       ++    E G+ +A+ G   A
Sbjct: 408 TSMSE---TFKRLAGRKGADDVEAAMVVT--NPETGEVQALIGSRQA 449



 Score =  145 bits (365), Expect = 1e-38
 Identities = 111/379 (29%), Positives = 172/379 (45%), Gaps = 60/379 (15%)

Query: 422 QGALVSLDPQNGAIRALVGGFAFEQSNYNRATQAKRQPGSSFKPFIYSAALD--NGYTAA 479
           + A+V  +P+ G ++AL+G      + +NRA  A R  GS  KP +Y  AL+  + YT  
Sbjct: 427 EAAMVVTNPETGEVQALIGSRQAGFAGFNRAIDAVRPIGSLVKPSVYLTALEQPSKYTLT 486

Query: 480 SLVNDAPIVFVDEYLDKVWRPKNDTNTFLGPIRIREALYKSRNLVSIRLLQAMGVGKTID 539
           S V D P   V     +VWRP+N      G I + + L  S NL + +L   +GV   I 
Sbjct: 487 SWVQDEPFS-VKGADGQVWRPQNYDRRPHGTIYLYQGLANSYNLSTAKLGLEVGVPNVIK 545

Query: 540 YMTRFGFSKSDLPPNLSLALGTATLTPMEIATGWSTFANGGYKIAPYLIDKIESRNGDTL 599
            + R G +  D P   ++ LG   ++PM++AT + T ANGG+      I  + +  G+ L
Sbjct: 546 TIGRLGVNV-DWPAFPAMLLGAGGMSPMQVATMYQTIANGGFNTPMRGIRSVLTAEGEPL 604

Query: 600 FTANPPRVPGDVVNGVAATDGLAAPSNGGITIEPAPGTTPATNAAATEPQTPAVAERIVD 659
                                                            + P   ++  D
Sbjct: 605 ------------------------------------------------KRYPFQIQQTFD 616

Query: 660 GRTTYILNSILEDVIKKGTGRRAL-ALGRP-DIAGKTGTTNESKDAWFSGYNADYVTTVW 717
               Y++ + ++ V+++GTGR     L R   +AGKTGT+N+S+D+WFSG++ D +  VW
Sbjct: 617 PGAIYLVQNAMQRVMREGTGRSVYNTLPRSLTLAGKTGTSNDSRDSWFSGFSQDLLAVVW 676

Query: 718 TGYDQPESLGRREF-GGTVALPIWMSYMGAALKDKPPHTQPEPEGILSLRIDPVSGRAAS 776
            G D     G+  F G T AL +W S+M  A  D  P   P+P+ ++   IDP SG  + 
Sbjct: 677 MGRDDN---GKTPFTGATGALQVWTSFMKKA--DPLPLDMPQPDNVVQAWIDPYSGHGSD 731

Query: 777 PSTPNAYFELFKSEDTPPS 795
            S P A    +     PP+
Sbjct: 732 ASCPGAVQMPYIRGSEPPA 750