Pairwise Alignments

Query, 820 a.a., peptidase from Pseudomonas simiae WCS417

Subject, 815 a.a., penicillin-binding protein 1a from Agrobacterium fabrum C58

 Score =  473 bits (1217), Expect = e-137
 Identities = 293/817 (35%), Positives = 435/817 (53%), Gaps = 59/817 (7%)

Query: 1   MIRLLK-FFGYSIVAIVCGLLLVFSGAYLY-LSPGLPSVEALRSIQLQIPLRVYSSDEKL 58
           MIRL+  FFG + V  +C    V    YL+ ++  LP    L + +  +  RV++ +  L
Sbjct: 1   MIRLIGYFFGLASVLFLCAA--VVGAIYLHGVTKDLPDYAVLSTYEPPVTTRVHAGNGAL 58

Query: 59  IAEFGEMRRTPIRFADIPPNFISALLSAEDDNFANHYGVDPSSLVRAAT---QLVKSGHI 115
           +AE+   +R  +    IP    +A LSAED NF NH GVD   L RA     Q + SG  
Sbjct: 59  MAEYAHEKRLFLPIQAIPDRVKAAFLSAEDKNFYNHPGVDIWGLGRAILVNLQNLGSGRR 118

Query: 116 QSGGSTITMQVAKNFFLTSERSFSRKATEILLALQIERQLTKDEILELYVNKIYLGNRAY 175
             G STIT QVAKNF LT++++  RK  E +L+ +IE+  +KD+ILELY+N+I+ G  +Y
Sbjct: 119 PVGASTITQQVAKNFLLTNDQTIDRKLKEAILSFRIEQTYSKDKILELYLNEIFFGLNSY 178

Query: 176 GIEAASQVYYGKSIRDASLAQMAMIAGLPKAPSRFNPLANPARSKERRDWILGRMYKLGK 235
           GI  A+  Y+ KS+ + ++A+ A +A LPK P+ ++P+     + ERRDW++ RM + G 
Sbjct: 179 GIAGAALTYFNKSVTELTIAETAYLASLPKGPANYHPIRREKAALERRDWVIDRMAENGY 238

Query: 236 IDQAAYESAIAEPLNASYHVPTPEVNA-PYIAEMARAEMVGRYGSEAYTE-GFRVTTTVP 293
           I  A    A  +PL  +       + A  Y AE  R ++V +YG EA  E G  V T+  
Sbjct: 239 ITVADATDAKKQPLGVNLRRGGAHIAASDYFAEEVRRQIVEKYGEEALLEGGLSVRTSFD 298

Query: 294 SNLQEIANDSVHSGLITYDQRHGYRGPESRLPGKTLSAWTTELGKQRAISGL---EPAIV 350
             +Q  A  ++  GL+ YD+R G+RGP  ++  +T   WT  L K + +  +   + A+V
Sbjct: 299 PQIQMEARKALQDGLVQYDERRGFRGPIEKI--ETAGDWTAALAKVKGLRDVPEWKVAVV 356

Query: 351 TQVKKDGLQVLTRTG----------EAHVAWDSMKWARPFLNTNSMGALPKQPSDVAQVG 400
             V  DG+ +  +              H++ ++M+WA  F + +   A  K P  V   G
Sbjct: 357 LAVAADGVDIGVQADPDAEDGDKRTRGHISAENMRWA--FRDASGKKATSKSPVGVVTAG 414

Query: 401 DLIRVQ--RQKDDSLKFSQVPLAQGALVSLDPQNGAIRALVGGFAFEQSNYNRATQAKRQ 458
           D++  Q      +  +  Q P  QG +V +DP  G + A+VGGF++ QS +NR+TQA RQ
Sbjct: 415 DVVYAQPLSGSGNEYRLRQPPKVQGGMVVMDPHTGRVLAMVGGFSYAQSEFNRSTQAMRQ 474

Query: 459 PGSSFKPFIYSAALDNGYTAASLVNDAPIVFVDEYLDKVWRPKNDTNTFLGPIRIREALY 518
           PGSSFKPFIY+AALDNGYT AS++ DAPI  V     +VW+P+N      GP  +R  + 
Sbjct: 475 PGSSFKPFIYAAALDNGYTPASVILDAPIEVVSG--GQVWKPQNYGGGSAGPSTLRLGIE 532

Query: 519 KSRNLVSIRLLQAMGVGKTIDYMTRFGFSKSDLPPNLSLALGTATLTPMEIATGWSTFAN 578
           KSRNL+++RL Q MG+    +Y  RFG     +PP LS++LG+   T M + + +S  AN
Sbjct: 533 KSRNLMTVRLAQDMGMNLVAEYAERFGI-YDKMPPLLSMSLGSGETTVMRMVSAYSVLAN 591

Query: 579 GGYKIAPYLIDKIESRNGDTLFTANPPRVPGDVVNGVAATDGLAAPSNGGITIEPAPGTT 638
           GG +I P LID+I+ R G T+F                                   G  
Sbjct: 592 GGKQIKPTLIDRIQDRYGKTIFRHEE---------------------------RGCEGCN 624

Query: 639 PATNAAATEPQTPAVAERIVDGRTTYILNSILEDVIKKGTGRRALALGRPDIAGKTGTTN 698
             +     EP      E+++D  T Y   S+LE V+K+GT    + +  P +AGKTGTTN
Sbjct: 625 ATSWQNQDEPVIVDNREQVLDPMTAYQTTSMLEGVVKRGTAAGKIKVDLP-VAGKTGTTN 683

Query: 699 ESKDAWFSGYNADYVTTVWTGYDQPESLGRREFGGTVALPIWMSYMGAALKDKPPHTQPE 758
           + KDAWF GY  D V  ++ G+D P  LGR   GG+++ PI+  ++  A K   P     
Sbjct: 684 DEKDAWFVGYTPDMVAGLYIGFDSPAPLGRGGTGGSLSAPIFGEFIADAAKHLEPSKFIV 743

Query: 759 PEGILSLRIDPVSGRAASPSTPNAYFELFKSEDTPPS 795
           P G+  + ++  +G AA+   P+   E FK    P S
Sbjct: 744 PAGMNFVAVNRKTGMAAAEGEPDTIMEAFKPGTGPAS 780