Pairwise Alignments

Query, 820 a.a., peptidase from Pseudomonas simiae WCS417

Subject, 764 a.a., penicillin-binding protein from Agrobacterium fabrum C58

 Score =  168 bits (426), Expect = 9e-46
 Identities = 96/281 (34%), Positives = 156/281 (55%), Gaps = 4/281 (1%)

Query: 24  SGAYLYLSPGLPSVEALRSIQLQIPLRVYSSDEKLIAEFGEMRRTPIRFADIPPNFISAL 83
           +G  LY    +PS  +    +    +++ S +  ++A  G      +   D+ P    A+
Sbjct: 90  AGLVLYYGARMPSASSWSIPERPPNVKIVSVNGSVLANRGTTGGEALALEDMSPYIPQAV 149

Query: 84  LSAEDDNFANHYGVDPSSLVRAATQLVKSGHIQSGGSTITMQVAKNFFLTSERSFSRKAT 143
           ++ ED  F +H+GVDP  L RA    V +G    GGST+T Q+AKN FL+ +R+  RK  
Sbjct: 150 MAIEDRRFYSHFGVDPLGLGRAIVTNVLTGRAVQGGSTLTQQLAKNLFLSPDRTLERKVQ 209

Query: 144 EILLALQIERQLTKDEILELYVNKIYLGNRAYGIEAASQVYYGKSIRDASLAQMAMIAGL 203
           E+LL+  +E + TKD+IL +Y+N++Y G+ AYG+EAAS+ Y+ KS RD +L + AM+AGL
Sbjct: 210 EVLLSFWLEHEFTKDQILAMYLNRVYFGSNAYGVEAASRRYFNKSARDVNLGEAAMLAGL 269

Query: 204 PKAPSRFNPLANPARSKERRDWILGRMYKLGKIDQAAYESAIAEPLNASYHVPTPEVNAP 263
            KAPSR +P  +P  ++ER   +L  M  +G I     ++A+++P   +    +   +  
Sbjct: 270 LKAPSRLSPARDPQAAEERAQVVLQSMRDVGFITDDEIKTAMSQPPTKAKRFWSGAEH-- 327

Query: 264 YIAEMARAEMVGRYGSEAYTEGFRVTTTVPSNLQEIANDSV 304
           Y A+M   E+ G  G     +   V TT+  NL+  A  ++
Sbjct: 328 YAADMVLEEVRGLVGE--VKQDIVVDTTIDPNLERDAEKAL 366



 Score =  168 bits (426), Expect = 9e-46
 Identities = 127/415 (30%), Positives = 191/415 (46%), Gaps = 85/415 (20%)

Query: 421 AQGALVSLDPQNGAIRALVGGFAFEQSNYNRATQAKRQPGSSFKPFIYSAALDNGYTAAS 480
           +Q ALVS+D   GAIRA+VGG  + QS +NRA +AKRQPGS+FKPF+Y AAL++G T  +
Sbjct: 380 SQAALVSIDG-TGAIRAVVGGADYAQSQFNRAVKAKRQPGSAFKPFVYVAALESGLTPYT 438

Query: 481 LVNDAPIVFVDEYLDKVWRPKNDTNTFLGPIRIREALYKSRNLVSIRLLQAMGVGKTIDY 540
           + ND P+   +      W P+N    + G + +  AL  S N ++ +L+  +G  +    
Sbjct: 439 IRNDGPVRIGN------WTPENYEKKYRGEVTLATALANSLNTIAAQLVMEVGPERVTQV 492

Query: 541 MTRFGFSKSDLPPNLSLALGTATLTPMEIATGWSTFANGGYKIAPYLIDKIESRNGDTLF 600
             R G  +S+L  N S+ALGT+ ++ ME+   ++ F NGGYK  P+++ +I   +G  L+
Sbjct: 493 AHRMGI-ESELQNNASIALGTSEVSLMELTASYAPFMNGGYKATPHIVKRITDADGKVLY 551

Query: 601 T---ANPPRVPGDVVNGVAATDGLAAPSNGGITIEPAPGTTPATNAAATEPQTPAVAERI 657
                NPPRV   +   +AAT                                       
Sbjct: 552 ENKYDNPPRV---LSEEIAAT--------------------------------------- 569

Query: 658 VDGRTTYILNSILEDVIKKGTGRRALALGRPDIAGKTGTTNESKDAWFSGYNADYVTTVW 717
                   +N +L  VI +GTG+ A   G    AGK+GTT   +DA F GY ++  T VW
Sbjct: 570 --------MNGMLSRVITEGTGKAARLQGW-QAAGKSGTTQSFRDALFVGYTSNLTTGVW 620

Query: 718 TGYDQPESLGRREFGGTVALPIWMSYMGAALKDKPPH----------------TQPEPEG 761
            G D   S+ ++  GG +    W  +M AA     P                  QP PE 
Sbjct: 621 FGNDDGTSM-KKVTGGGLPARAWKDFMTAAHSGLSPSPLFGLGAGGVPPLGDMQQPAPEA 679

Query: 762 ILSLRIDPVSGRAASPSTPNAYFELFKSEDTPPSVNELGNGVVPGSPLPADEAAP 816
             S   + +S      +T    +      D P S N+ G  + P + +P+ +  P
Sbjct: 680 APSSIGEIISNALGGGTTDTRAY-----PDAPVSPNQPGMAMPPAN-IPSRDIEP 728