Pairwise Alignments

Query, 262 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

Subject, 298 a.a., CheW domain protein from Pseudomonas putida KT2440

 Score =  346 bits (888), Expect = e-100
 Identities = 192/307 (62%), Positives = 209/307 (68%), Gaps = 55/307 (17%)

Query: 1   MNRPVELKTRPQLALESYLDALLQDATAQEFPEPILVLEPAVEPEAVLDEFQLAVLEEQA 60
           M +  +  TRPQ+AL+SYLD LLQ+AT  +            E  AV DEF  AV EEQA
Sbjct: 1   MTQTRQTSTRPQMALQSYLDGLLQEATEAK---------DLSEQPAVADEFAEAVREEQA 51

Query: 61  RDAR-----------------------------SVVPMTPQVAPVVVAPAVVE------- 84
           RDAR                             SV+P+   V  VV    V E       
Sbjct: 52  RDARQPARPEPAEAAAASFAPRPFAEPRLAVLPSVMPVEAPVVTVVEQEVVAEASIPVLV 111

Query: 85  ---------PVVEVHLP-PSITPPPVAGDDRPSWAAEPFECLLFDVAGLTLAVPLVCLGS 134
                    P+V+VHLP P++  PP   D RP WAAEPFECLLFDVAGLTLAVPLVCLGS
Sbjct: 112 EEQTVEPAVPLVDVHLPAPNLPVPPATVDGRPVWAAEPFECLLFDVAGLTLAVPLVCLGS 171

Query: 135 IYSLEGQELTPLFGQPEWFLGILPSQAGNLKVLDTARWVMPDRYRDDFRQGLQYVISVQG 194
           IY+L GQELTPLFGQP+WFLGIL  QAGNLKVLDTARWVMPDRYRDDFRQGLQYVISVQG
Sbjct: 172 IYTLAGQELTPLFGQPDWFLGILTCQAGNLKVLDTARWVMPDRYRDDFRQGLQYVISVQG 231

Query: 195 YEWGLAVHQVSRSLRLDPNEIKWRSHRGQRPWLAGTVIEHMCALLDVAELAELIASGAVK 254
           YEWGLAVHQVSRSLRLDP+EIKWRS RGQRPWLAGTVIEHMCALLDVA LAELIASGAVK
Sbjct: 232 YEWGLAVHQVSRSLRLDPSEIKWRSQRGQRPWLAGTVIEHMCALLDVAALAELIASGAVK 291

Query: 255 AMPVNKR 261
            M   ++
Sbjct: 292 QMHAKQK 298