Pairwise Alignments

Query, 311 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

Subject, 309 a.a., putative chemotaxis protein from Pseudomonas putida KT2440

 Score =  337 bits (863), Expect = 3e-97
 Identities = 171/305 (56%), Positives = 225/305 (73%), Gaps = 1/305 (0%)

Query: 1   MAGILDTVDQRTQLVGENRLEILMFRLFGRQLFAINVFKVQEVLQLPKLTLMPQRHPFVC 60
           MAG++D+V+QRTQLVG+NRLE+L+FRL G QL+ INVFKV+EVLQ P LTL+P+ HP V 
Sbjct: 1   MAGVMDSVNQRTQLVGQNRLELLLFRLNGEQLYGINVFKVREVLQCPALTLLPKAHPVVR 60

Query: 61  GVVNLRGQTLPVIDLSQAIGMRPLVPGP-NSTIIVTEYNRSVQAFLVGGVDRIVNMNWEA 119
           GV N+RG T+P++DLS A G+RPL     NS +I+TEYN   Q FLV  V+RIVNMNWE 
Sbjct: 61  GVANIRGATIPILDLSMATGLRPLQEDTRNSFVIITEYNTKTQGFLVHSVERIVNMNWEE 120

Query: 120 ILPPPTSAGRQHYLTAISKVDDQLVEIIDVEKVLAEIVPYNAKVSREKLEDPVLERARGR 179
           I PPP   GR HYLTA+++VD+++VEIIDVEKVLAE+ P +  VS   ++  V ++A   
Sbjct: 121 IHPPPKGTGRDHYLTAVTRVDNRMVEIIDVEKVLAEVSPSSESVSAGVIDAEVQDKAVLM 180

Query: 180 EVLLVDDSNVALSQLRDTLGQLGVKMHIASDGLKALNMLKAWADSGQVMTDKLLMIFTDA 239
            VL VDDS+VA  Q+   L  +GV++   +DG +ALN L+   D G+   ++ LM+ +D 
Sbjct: 181 RVLTVDDSSVARKQVSRCLQTVGVEVVALNDGRQALNYLRQLVDEGKKPEEEFLMMISDI 240

Query: 240 EMPEMDGYRLTTEIRNDPRLRGLYVVLHTSLSGSFNDSMVKKVGCDNFLSKFQPDKLVDV 299
           EMPEMDGY LT EIR+DPR++ L++ LHTSLSG FN +MVKKVG D+FL+KF+PD L   
Sbjct: 241 EMPEMDGYTLTAEIRSDPRMQKLHICLHTSLSGVFNQAMVKKVGADDFLAKFKPDDLAQR 300

Query: 300 VRQRL 304
           V  R+
Sbjct: 301 VVDRI 305