Pairwise Alignments

Query, 311 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

Subject, 299 a.a., putative chemotaxis protein from Pseudomonas putida KT2440

 Score =  197 bits (500), Expect = 3e-55
 Identities = 112/287 (39%), Positives = 163/287 (56%), Gaps = 4/287 (1%)

Query: 12  TQLVGENRLEILMFRLFGRQLFAINVFKVQEVLQLPKLTLMPQRHPFVCGVVNLRGQTLP 71
           TQ    + L +L+F L   +L AIN+ KV E++  P LT +P+ HP V GV  LRG +L 
Sbjct: 3   TQNARADSLSLLLFTLRSGKLMAINLLKVSEIIPCPPLTKLPESHPHVKGVATLRGHSLS 62

Query: 72  VIDLSQAIGMRPLVPGPNSTIIVTEYNRSVQAFLVGGVDRIVNMNWEAILPPPTSAGRQH 131
           VIDLS+AIG +PLV      +IVTE +RS Q   V  V RIV+     I PPP ++G + 
Sbjct: 63  VIDLSRAIGEQPLVDPQGGCLIVTEISRSRQGLHVQAVSRIVHCLSTDIKPPPYASGTRS 122

Query: 132 YLTAISKVDDQLVEIIDVEKVLAEIVPYNAKVSREKLEDPVLERARGREVLLVDDSNVAL 191
           ++T +++VD+ LV+++D+EKV+  I P  A+     L +          +L+VDDS VAL
Sbjct: 123 FITGVTRVDNTLVQVLDIEKVIHAIAPPVAEPVHSSLNEEDASLLAAANILVVDDSQVAL 182

Query: 192 SQLRDTLGQLGVKMHIASDGLKALNMLKAWADSGQVMTDKLLMIFTDAEMPEMDGYRLTT 251
            Q   TL  LG++ H A     A+N+L     + Q    ++ +I +D EM EMDGY  T 
Sbjct: 183 QQSVHTLRNLGIECHTARSAKDAINVLLELQGTAQ----EINIIVSDIEMSEMDGYAFTR 238

Query: 252 EIRNDPRLRGLYVVLHTSLSGSFNDSMVKKVGCDNFLSKFQPDKLVD 298
            +R  P  + LYV+LHTSL  + +     + G +  L+KF   +L D
Sbjct: 239 TLRETPDFQHLYVLLHTSLDSAMSSEKATQAGANAILTKFSSPELTD 285