Pairwise Alignments

Query, 257 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas simiae WCS417

Subject, 276 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas simiae WCS417

 Score =  164 bits (415), Expect = 2e-45
 Identities = 112/260 (43%), Positives = 137/260 (52%), Gaps = 25/260 (9%)

Query: 4   IDTSFPAKGFNERNGEPVRQVILHYTAAPFASSLRTLTQDGVSAHYLLPDPDDPRYRDAG 63
           +DT+  +   NER    +R ++LHYT     +SL  LT    SAHYL        +    
Sbjct: 31  VDTTHTSPNQNER----IRFLVLHYTVFDDKNSLDALTNGTASAHYLAYSTPHKHHNLPV 86

Query: 64  YEELRVFRLVEEDKRAWHAGVSHWAGRDNLNSRSIGIEIVNLARDDG--GVFTFPAYGEE 121
                V +LV E KRAWHAGVSHW  R NLN  SIGIEIVN    +G  G   FP Y E 
Sbjct: 87  -----VLQLVPEAKRAWHAGVSHWGNRANLNDTSIGIEIVNAGFIEGPTGRLWFP-YTEA 140

Query: 122 QTQVLIALVRDILGRYPQIGPTDILGHSDVAFSRKSDPGPCLPWRRLHDAGVGAWFDEAT 181
           Q  ++  L  D++ RY  I P +++GHSD+A  RKSDPGP  PW+ L + G+GAW D  T
Sbjct: 141 QLALVKHLAADVIKRY-AIEPQNVVGHSDIAPFRKSDPGPLFPWQALSEHGIGAWPDAVT 199

Query: 182 QAMYQRRFCLGLPSEVE-----VERAFQRYGYA-PAKNRQGFEQR--TRAFQMHFRPRDY 233
                 +   G P         V+RA   YGY  P       E R   RAFQMHFRP   
Sbjct: 200 ----VHKHLAGRPESQTVDVSIVQRALATYGYTIPQSGVLDDETRQVIRAFQMHFRPAGI 255

Query: 234 SGSLDAQTCAILYALNEKYL 253
           SG  DA+T A+  AL EKYL
Sbjct: 256 SGIPDAETEAVALALVEKYL 275