Pairwise Alignments

Query, 257 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas simiae WCS417

Subject, 262 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase from Pseudomonas putida KT2440

 Score =  167 bits (424), Expect = 2e-46
 Identities = 111/254 (43%), Positives = 139/254 (54%), Gaps = 24/254 (9%)

Query: 2   LVIDTSFPAKGFNERNGEPVRQVILHYTAAPFASSLRTLTQDGVSAHYLLPDPDDPRYRD 61
           L ID S P+   + R    ++ V+LHYT A    SL  LT   VS+HYL+ D        
Sbjct: 24  LRIDRSHPSANQDNR----IQFVVLHYTNASLERSLALLTHGEVSSHYLIGDGP------ 73

Query: 62  AGYEELRVFRLVEEDKRAWHAGVSHWAGRDNLNSRSIGIEIVNLARDD--GGVFTFPAYG 119
                  V++LV+E++RAWHAG S W GR  LNS SIGIEIVN    D   G    P Y 
Sbjct: 74  -----ATVYQLVDENRRAWHAGESQWQGRTWLNSSSIGIEIVNPGFTDTPNGRVWHP-YS 127

Query: 120 EEQTQVLIALVRDILGRYPQIGPTDILGHSDVAFSRKSDPGPCLPWRRLHDAGVGAWFDE 179
           E Q Q LIAL++DI+ R   I P  I+GHSD+A  RK DPGP  PW+RL DAG+G W D 
Sbjct: 128 EAQVQALIALLKDIVKRN-NIEPRHIIGHSDIAPLRKLDPGPLFPWKRLADAGLGIWPDA 186

Query: 180 ATQAMYQRRFCLGLPSEVEVERAFQRYGYAPAKNRQGFEQRTR----AFQMHFRPRDYSG 235
              A  Q  F +  PS    ++   R+GY   +     +  TR    AFQM FRP+ + G
Sbjct: 187 NAVARQQAYFSVNPPSVGWYQQELARFGY-QIEQTGVLDVATRHVVAAFQMRFRPQRFDG 245

Query: 236 SLDAQTCAILYALN 249
             DAQT A+L  LN
Sbjct: 246 MPDAQTAAMLQVLN 259