Pairwise Alignments

Query, 211 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

Subject, 215 a.a., Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  189 bits (479), Expect = 4e-53
 Identities = 99/216 (45%), Positives = 139/216 (64%), Gaps = 8/216 (3%)

Query: 3   LSNIHILYQDDAVLVVNKPTLLLSVPGRADDNKDCLITRLQENGYPEARIVHRLDWETSG 62
           +S ++ +++DD ++V++KP  LL+VPGR  D +DCL  R Q   +P+A +VHRLD  TSG
Sbjct: 1   VSTLNTIHEDDQMIVLDKPAGLLAVPGRGPDKQDCLSARAQAR-WPDALVVHRLDMATSG 59

Query: 63  IILLARDADTHRELSRQFHDRETEKAYTALAWG---QPELDSG--SIDLPLRYDPPTKPR 117
           ++++AR  +  R+LSR F  R+  K YTA+  G    P  D+G  +IDLPL  D P +PR
Sbjct: 60  LVVMARGIEAQRQLSRAFEQRQVHKRYTAVVAGTLHNPVHDNGWNTIDLPLTIDWPNRPR 119

Query: 118 HVVDHEFGKHALTFWKVLERCGD--WCRVELTPITGRSHQLRVHMLSIGHPLLGDGLYAH 175
            +V  E GK ++T W++     D    R+EL P+TGR+HQLRVH+ +IGHP+LGD LYA 
Sbjct: 120 SIVSAELGKPSVTRWRLAGPATDDHTTRLELEPVTGRTHQLRVHLQAIGHPILGDMLYAT 179

Query: 176 EQALAAWPRLCLHASMLSFTHPQSGERLRFECPAPF 211
            +  A  PRL LHA  LS  HPQ G  + F   +PF
Sbjct: 180 PEQQARAPRLLLHAHQLSLPHPQHGATMDFHSTSPF 215