Pairwise Alignments

Query, 211 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

Subject, 219 a.a., pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) (NCBI) from Escherichia coli BW25113

 Score =  212 bits (540), Expect = 4e-60
 Identities = 110/205 (53%), Positives = 140/205 (68%), Gaps = 2/205 (0%)

Query: 8   ILYQDDAVLVVNKPTLLLSVPGRADDNKDCLITRLQENGYPEARIVHRLDWETSGIILLA 67
           ILYQDD ++VVNKP+ LLSVPGR +++KD ++TR+Q + YP+A  VHRLD  TSG+I++A
Sbjct: 16  ILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRD-YPQAESVHRLDMATSGVIVVA 74

Query: 68  RDADTHRELSRQFHDRETEKAYTALAWGQPELDSGSIDLPLRYDPPTKPRHVVDHEFGKH 127
                 REL RQF +RE +K Y A  WG P    G +DLPL  D P +P+  V +E GK 
Sbjct: 75  LTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWPNRPKQKVCYETGKP 134

Query: 128 ALTFWKVLERCGD-WCRVELTPITGRSHQLRVHMLSIGHPLLGDGLYAHEQALAAWPRLC 186
           A T ++V+E   D   RV L PITGRSHQLRVHML++GHP+LGD  YA  +A A  PRL 
Sbjct: 135 AQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRFYASPEARAMAPRLL 194

Query: 187 LHASMLSFTHPQSGERLRFECPAPF 211
           LHA ML+ THP  G  + F+ PA F
Sbjct: 195 LHAEMLTITHPAYGNSMTFKAPADF 219