Pairwise Alignments

Query, 739 a.a., primosomal protein N' from Pseudomonas simiae WCS417

Subject, 724 a.a., primosomal protein N' from Rhodanobacter sp000427505 FW510-R12

 Score =  638 bits (1646), Expect = 0.0
 Identities = 347/736 (47%), Positives = 458/736 (62%), Gaps = 14/736 (1%)

Query: 4   AILRLALPSPLRRLFDYRAPAGVLRAQLQPGMRVRAPFGRREMIGILVEVADHSEVPAEK 63
           A+LR+ALP PL  LFDY  PA     +   G RV  PFGR  ++G++V +   + V   +
Sbjct: 3   AVLRVALPVPLPSLFDYLPPAS---GEAGVGSRVLVPFGRHRLVGVVVAIDAETAVDGGR 59

Query: 64  LKPALAMLDATPPLPPALFKLCLWTAQYYQHSLGDTLSWALPVLLRQGELAEARQERFWS 123
           LK  L +LD    L   L +   W A Y+  + G+  + ALP+ LR+ +      + +WS
Sbjct: 60  LKQTLRLLDDDALLDAELMQTLAWAADYWLGAPGEAYANALPLALREPKPLPPIGDEYWS 119

Query: 124 MVPGARLDDPRIARAPRQREALATLAQHPHGVAHQLLSKLMLSKDSLDLLLAKGLVQVEI 183
           +           +R    +  LA L+      A QL  +    +++   L A GL+  E 
Sbjct: 120 LTSAGHSAHDAGSRRGSSKALLALLSGGALS-AQQLGERQPGWREAARRLAAVGLL--ER 176

Query: 184 RKHAPDARHEHWLAQPELPLNPEQRAAYEAIRAGFDSFHAFLLAGVTGSGKTEVYLQLIR 243
            +  P  R       P  PLN EQR A  ++ A    +  FLL GVTGSGKTEVYL LI 
Sbjct: 177 SERPPSVRPLAPSRAP--PLNDEQRQAVASVGASLGQYQPFLLDGVTGSGKTEVYLALIE 234

Query: 244 ETLQAGKQALVLIPEINLGPQTLARFEQRFNARIALVHSAVNDRERLESWLAARDGEADI 303
           + L   +QAL+L+PEI L PQT+ R  +R    + ++HS +++ +R  +WL AR G A +
Sbjct: 235 QVLAQDRQALLLVPEIGLAPQTVRRLRERLGVGVEVLHSNLSEGDRARAWLRARAGSARV 294

Query: 304 IIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQEDIPIVLGSATP 363
           I+GTRSA+FTP+   GLII+DEEHDG+YKQQEG RYHARDLALVRAR   +P++LGS TP
Sbjct: 295 ILGTRSAVFTPLPRAGLIIVDEEHDGAYKQQEGFRYHARDLALVRARALGVPVLLGSGTP 354

Query: 364 SLESLHNAYTGRYGLLRLNERAGGAKQPRFLRLDVKSRPLDSGISGPMQQAIGQTLAAGQ 423
           SLESL N   GRY  L L  R G  + P    +D++++ L+ G+S  +  A+ +T+A G+
Sbjct: 355 SLESLANVEAGRYRSLHLRARPGAVRPPMVQIVDMRAQHLEHGLSPALLTAVAETVARGE 414

Query: 424 QVLVFLNRRGFAPTLLCHDCGWMSECERCDARMTVHQRYGELRCHHCGHVERVPRHCPQC 483
           Q LVF NRRG+AP LLCH CGW + C RC+  +T+H    +L CHHC + +RVP  CP C
Sbjct: 415 QALVFRNRRGYAPVLLCHACGWHAACPRCERPLTLHAGRRQLICHHCDYRQRVPPACPTC 474

Query: 484 GKVDLRPVGAGTERAEERLGILFPDYPVLRVDRDSTSRKDAMNQLFATIQKGHPCILIGT 543
           G  +L+  G GTER EE L   FP  PVLRVDR++T R+DA  QL AT++   P IL+GT
Sbjct: 475 GAGELKAQGQGTERLEEALLAQFPQVPVLRVDRETTRRRDAFEQLLATLRDDQPAILVGT 534

Query: 544 QMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGRVIIQTH 603
           QMLAKGH  P +TLV+I+  D GL S DFRA ER+AQL+VQVAGRAGRA +PGRV++QTH
Sbjct: 535 QMLAKGHDLPNLTLVAIVGVDEGLHSIDFRAGERLAQLVVQVAGRAGRARKPGRVLLQTH 594

Query: 604 LADHPLLIQLTEQGYFAFAEQALSERRAAGLPPFSHLALLRAEAHKPGQAEGFLDEACSA 663
             +HPLL  L  QGY A A + L+ERR   LPP+SH  LLRAEA +  Q E FL  A +A
Sbjct: 595 QPEHPLLRCLLAQGYAAAARELLAERRLIRLPPYSHQVLLRAEAVQREQVEAFLAAAHAA 654

Query: 664 AERLLGELGLSGIELLGPVPAPMERRAGRYRAQLLLQATSRAPLHRLLSSWLLALEQMPS 723
                       +++ GP+PAPM  RAGR R QLLL++ SR  LH +L  W LAL  +PS
Sbjct: 655 LP------ADDRLQVAGPMPAPMPLRAGRQRGQLLLESASRQALHAMLRPWQLALNALPS 708

Query: 724 GRQVRWSLDVDPVDLY 739
            R++RWSLDVDP+DLY
Sbjct: 709 ARRLRWSLDVDPIDLY 724