Pairwise Alignments

Query, 739 a.a., primosomal protein N' from Pseudomonas simiae WCS417

Subject, 1149 a.a., transcription-repair coupling factor from Pseudomonas putida KT2440

 Score = 68.9 bits (167), Expect = 1e-15
 Identities = 67/226 (29%), Positives = 101/226 (44%), Gaps = 24/226 (10%)

Query: 205 PEQRAAYEAIRAGFDSFHAF--LLAGVTGSGKTEVYLQLIRETLQAGKQALVLIPEINLG 262
           P+Q+AA EA+RA   +      L+ G  G GKTEV ++     + +G+Q  VL+P   L 
Sbjct: 605 PDQQAAIEAVRADMLAPKPMDRLVCGDVGFGKTEVAMRAAFIAVHSGRQVAVLVPTTLLA 664

Query: 263 PQTLARFEQRFNARIALVHSAVNDRERLESWLAARD---GEADIIIGTRSALFTPM--KN 317
            Q    F  RF      V      +   E   AA D   G+ DI+IGT   L   +  K+
Sbjct: 665 QQHYNSFRDRFADWPVTVEVMSRFKSAKEVAAAAADLAEGKIDILIGTHKLLQDDVRFKD 724

Query: 318 PGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQEDIPIVLGSATPSLESLHNAYTGRYG 377
            GL IIDEEH    +Q+E L          +A + ++ I+  +ATP   +L+ A  G   
Sbjct: 725 LGLAIIDEEHRFGVRQKEQL----------KALRSEVDILTLTATPIPRTLNMAVAGMRD 774

Query: 378 LLRLNERAGGAKQPRFLRLDVKSRPLDSGISGPMQQAIGQTLAAGQ 423
           L  +         P   RL V++  ++   S   +  + + L  GQ
Sbjct: 775 LSII-------ATPPARRLSVRTFVMEQNKSTVKEALLRELLRGGQ 813