Pairwise Alignments

Query, 298 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 308 a.a., Uncharacterized HTH-type transcriptional regulator YfeR from Escherichia coli ECRC62

 Score =  125 bits (314), Expect = 1e-33
 Identities = 86/295 (29%), Positives = 147/295 (49%), Gaps = 7/295 (2%)

Query: 1   MKNSIQHIQAFLAVARTGSFTKAANELHLSPSALTVQVQQLEDWLGVALLDRSPRHVSIT 60
           M  S++ ++ F+ VA+  SF++A   + LS SA++  V++LE+  GV LLDR+ R V +T
Sbjct: 1   MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60

Query: 61  AAGQDARGPMEKLLLDLDNIVTGSRDLAALRRGVVTIAALPSVCAGALPPVLRLFRERFA 120
            AGQ     +E+LL +L++ +  +  +     G V +AA  ++ A  +P  +     R+ 
Sbjct: 61  DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120

Query: 121 GIEVRLHDLVAHRIHAQVRSGEVDFGIGVRARLSHGLEFVPVLNDRLCAFVPLDHPLTRF 180
            I+  LHD     +   +R G+VDFGI +       L+   +L++        D  L   
Sbjct: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180

Query: 181 PQLTLEQLADQPIILTGRDSSVREQVDALFDQTRLTLNAGMEANYMSTVLALVRQGLGIS 240
             +  + L    ++L    S  R  +DA   +  +  N   E  + +T+  +V  G+GIS
Sbjct: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240

Query: 241 VLPESAADSLEG----LKRINIEHPGVNREIGLISRSGMGLSPAAQRCFDLLHDE 291
           +LP  A    EG    +KRI    P V R++ L+ R    LS AA+  +D++ D+
Sbjct: 241 ILPALALPLPEGSPLVVKRIT---PVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292