Pairwise Alignments

Query, 608 a.a., long-chain acyl-CoA synthetase from Pseudomonas simiae WCS417

Subject, 548 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score = 97.8 bits (242), Expect = 1e-24
 Identities = 128/534 (23%), Positives = 206/534 (38%), Gaps = 45/534 (8%)

Query: 58  PDGAALLYADRVLSYTEVNQSANRIAHHLHAQGIRKGDVVAMFIENRPELLLNVLAVAKL 117
           P   A++Y  R  SY ++++ +  +A  L   G++ G+ VA+   N PE+L     V   
Sbjct: 34  PQRDAVIYGARRYSYRQLHERSRALASALERVGVQPGERVAILAPNIPEMLEAHYGVPGA 93

Query: 118 GGICAMLNTAQTQAALVHSLNLVSPAAIVVGAELVAAYEAVRNQVAIPAERTWFVADQQA 177
           G +   +N      ++   L   +   ++   E  A        +  P        DQ  
Sbjct: 94  GAVLVCINIRLEGRSIAFILRHCAAKVLICDREFGAVANQALAMLDAPPLLVGIDDDQAE 153

Query: 178 SALPDGYSDLMAASTEAPVDNPPSSAQIFFNDPCFYIYTSGTTGLPKAGIMKHGRWTKTA 237
            A      D  A   +     P S+ Q  +       YTSGTTG PK G++ H R     
Sbjct: 154 RADLAHDLDYEAFLAQGDPARPLSAPQNEWQSIAIN-YTSGTTGDPK-GVVLHHRGAYLN 211

Query: 238 VSFGSIALDMGPDDVLYCTLPLYHATGLCVCWGSAIIGASGFAIRRKFSASQFWDDARRF 297
              G++   +GP  V   TLP++H  G    W   + G +   +R+        + A   
Sbjct: 212 ACAGALIFQLGPRSVYLWTLPMFHCNGWSHTWAVTLSGGTHVCLRK--VQPDAINAAIAE 269

Query: 298 KATTLGYVGELCRYLLDQPTNVSDRDHRVTKMVGNGLRP-GVWAQFKAR----------- 345
            A T      +   +L    + S     V+ + G    P  V A  +AR           
Sbjct: 270 HAVTHLSAAPVVMSMLIHAEHASAPPVPVSVITGGAAPPSAVIAAMEARGFNITHAYGMT 329

Query: 346 --YGVEHVCELYAASDGNIGFTNILNFDNTVGFC---LQHWALVDYAHDSGEPVRGSDGF 400
             YG   +C L+      +       F +  G     L+   ++D   D+G PV  +DG 
Sbjct: 330 ESYGPSTLC-LWQPGVDELPLEARAQFMSRQGVAHPLLEEATVLD--TDTGRPV-PADGL 385

Query: 401 MLKVKTGGQGLLLARIDEKSPYDGYT-DPEKNRKVILTDVFEKGDRYFNTGDLVRSIGFG 459
            L       G L+ R    +   GY  +PE  R  +        + + +TGDL      G
Sbjct: 386 TL-------GELVVR--GNTVMKGYLHNPEATRAAL-------ANGWLHTGDLAVLHLDG 429

Query: 460 HAQFVDRLGDTYRWKGENVSTTEVENVLLQHPQIAEVVAYGVEIENTNGRAGMVAITPSE 519
           + +  DR  D     GEN+S+ E+E VL QHP++ E                      ++
Sbjct: 430 YVEIKDRAKDIIISGGENISSLEIEEVLYQHPEVVEAAVVARPDSRWGETPHAFVTLRAD 489

Query: 520 SLASLDMRELLQFAHGQLPHYAVPLFLRIKVKMETTGTFKYQKVKLKEEAFDPE 573
           +LAS D  +L+++   +L H+  P  + + V +  T T K QK  L+E A   E
Sbjct: 490 ALASGD--DLVRWCRERLAHFKAPRHVSL-VDLPKTATGKIQKFVLREWARQQE 540