Pairwise Alignments

Query, 445 a.a., ATP-dependent protease ATP-binding subunit HslU from Pseudomonas simiae WCS417

Subject, 427 a.a., Clp protease ATP-binding protein from Pseudomonas simiae WCS417

 Score = 95.9 bits (237), Expect = 2e-24
 Identities = 56/148 (37%), Positives = 90/148 (60%), Gaps = 16/148 (10%)

Query: 4   TPREIVHELNRHIIGQDDAKRAVAIALRNRWRRMQLPEEL--RVEVTPKNILMIGPTGVG 61
           +P+EI   L++++IGQ+ AK+ +A+A+ N ++R+   ++    VE+   NIL+IGPTG G
Sbjct: 67  SPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKKGDEVELGKSNILLIGPTGSG 126

Query: 62  KTEIARRLAKLANAPFIKVEATKFTEVGYVGRDVESIIR--------DLADAALKLLREQ 113
           KT +A  LA+L N PF   +AT  TE GYVG DVE+II+        D+  A + ++   
Sbjct: 127 KTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYID 186

Query: 114 EMTKVSHRAE------DAAEERILDALL 135
           E+ K+S +++      D + E +  ALL
Sbjct: 187 EIDKISRKSDNPSITRDVSGEGVQQALL 214



 Score = 87.4 bits (215), Expect = 8e-22
 Identities = 72/213 (33%), Positives = 103/213 (48%), Gaps = 58/213 (27%)

Query: 247 QHGIVFIDEIDKVAKRGNSGGV--DVSREGVQRDLLPLIEGCTVNT-----------KLG 293
           Q GIV+IDEIDK++++ ++  +  DVS EGVQ+ LL LIEG   +            +  
Sbjct: 179 QMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFL 238

Query: 294 MVKTDHILFIASGAFH-LSK----------------------------------PSDLV- 317
            V T +ILFI  GAF  L K                                  P DLV 
Sbjct: 239 QVDTRNILFICGGAFSGLEKVIQQRSTRGGIGFSAEVRSKEEGKKVGESLREVEPDDLVK 298

Query: 318 ----PELQGRLPIRVELKALTPGDFERILSEPHASLTEQYRELLKTEGLGIEFQADGIKR 373
               PE  GRLP+   L  L      +IL+EP  +LT+QY +L + EG+ +EF+ D +K 
Sbjct: 299 FGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYAKLFEMEGVDLEFRTDALKS 358

Query: 374 LAEIAWQVNEKTENIGARRLHTLLERLLEEVSF 406
           +A+ A  +  KT   GAR L ++LE +L +  +
Sbjct: 359 VAKRA--LERKT---GARGLRSILEGVLLDTMY 386