Pairwise Alignments

Query, 445 a.a., ATP-dependent protease ATP-binding subunit HslU from Pseudomonas simiae WCS417

Subject, 424 a.a., ATP-dependent protease ATP-binding subunit ClpX from Dickeya dianthicola ME23

 Score = 93.6 bits (231), Expect = 1e-23
 Identities = 55/147 (37%), Positives = 86/147 (58%), Gaps = 15/147 (10%)

Query: 4   TPREIVHELNRHIIGQDDAKRAVAIALRNRWRRMQLPE-ELRVEVTPKNILMIGPTGVGK 62
           TP EI   L+ ++IGQ+ AK+ +A+A+ N ++R++  +    VE+   NIL+IGPTG GK
Sbjct: 66  TPHEIRRHLDDYVIGQEQAKKVLAVAVYNHYKRLRNSDGNSSVELGKSNILLIGPTGSGK 125

Query: 63  TEIARRLAKLANAPFIKVEATKFTEVGYVGRDVESIIR--------DLADAALKLLREQE 114
           T +A  LA+  + PF   +AT  TE GYVG DVE+II+        D+  A   ++   E
Sbjct: 126 TLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDE 185

Query: 115 MTKVSHRAE------DAAEERILDALL 135
           + K+S +++      D + E +  ALL
Sbjct: 186 IDKISRKSDNPSITRDVSGEGVQQALL 212



 Score = 85.1 bits (209), Expect = 4e-21
 Identities = 74/236 (31%), Positives = 106/236 (44%), Gaps = 62/236 (26%)

Query: 247 QHGIVFIDEIDKVAKRGNSGGV--DVSREGVQRDLLPLIEGCTV-----------NTKLG 293
           Q GIV+IDEIDK++++ ++  +  DVS EGVQ+ LL LIEG                +  
Sbjct: 177 QRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQGGRKHPQQEFL 236

Query: 294 MVKTDHILFIASGAFH----------------------------------LSK--PSDLV 317
            V T  ILFI  GAF                                   LS+  P DL+
Sbjct: 237 QVDTSKILFICGGAFAGLDKVIEQRTDTGRGIGFNATVKGLSQKATEGELLSQVEPGDLI 296

Query: 318 -----PELQGRLPIRVELKALTPGDFERILSEPHASLTEQYRELLKTEGLGIEFQADGIK 372
                PE  GRLP+   LK L      +IL EP  +LT+QY+ L K EG  +EF+ + + 
Sbjct: 297 KFGLIPEFIGRLPVVATLKELDEEALIQILREPKNALTKQYQALFKLEGAELEFRDEALT 356

Query: 373 RLAEIAWQVNEKTENIGARRLHTLLERLLEEVSFSAGDLAGAQNGEVIKIDAEYVN 428
            +A+ A          GAR L +++E  L E  +   DL   +N + + ID   ++
Sbjct: 357 AIAKKA-----MARKTGARGLRSIVEAALLETMY---DLPSLENVDKVVIDDSVIS 404