Pairwise Alignments

Query, 1614 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 788 a.a., Secreted effector protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 84.3 bits (207), Expect = 5e-20
 Identities = 125/466 (26%), Positives = 199/466 (42%), Gaps = 58/466 (12%)

Query: 1111 HQTSVPS----LNLDGMRIGSLPTLPPEIRFDHVEQLSLKNMQLGDDVAYFLKCFK---- 1162
            H  ++PS    L + G ++ SLP LPP +     ++LS+ + QL    A   +  K    
Sbjct: 276  HLPALPSGLCKLWIFGNQLTSLPVLPPGL-----QELSVSDNQLASLPALPSELCKLWAY 330

Query: 1163 ------------GLRRLDLDRNRLTRLPEILSRMLALDSLSMPRNRLALTEYTRVKLADM 1210
                        GL+ L +  N+L  LP + S +  L + +   NRL          A  
Sbjct: 331  NNQLTSLPMLPSGLQELSVSDNQLASLPTLPSELYKLWAYN---NRLTSLP------ALP 381

Query: 1211 STLRRLDLSHNPLEKLVDVGKMRDLHTLLLQDTKITDLPVGLGRLAQLEQMDLRGNSITV 1270
            S L+ L +S N L  L  +    +L  L++   ++T LP+    L  L    +  N +T 
Sbjct: 382  SGLKELIVSGNRLTSLPVLPS--ELKELMVSGNRLTSLPMLPSGLLSLS---VYRNQLTR 436

Query: 1271 LPEWVFTTPRSFSQSVNLGGNPLSRSTVEALERYRDEVGIGMGYVEDDQ-----PRMTEL 1325
            LPE +     S   +VNL GNPLS  T++AL       G     +  D      PR T  
Sbjct: 437  LPESLIHL--SSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRA 494

Query: 1326 K--ARALWL-PKDTASRDAHKRAVWANLRDDPESAPLFELLAQLSATADSRYVRE-DLTR 1381
               A A WL P          R       D+ ++  LF  L +LS T +  ++++     
Sbjct: 495  LHLAAADWLVPAREGEPAPADRWHMFGQEDNADAFSLF--LDRLSETEN--FIKDAGFKA 550

Query: 1382 RVWEVLQATHDSVGLRERVFQLAAHP-ANCSDGTAQIFSQLEVLKEVESATLQAGRAQGN 1440
            ++   L    +   LR   F +A    ++C D       Q++ ++ V +A  + G+   +
Sbjct: 551  QISSWLAQLAEDEALRANTFAMATEATSSCEDRVTFFLHQMKNVQLVHNA--EKGQYDND 608

Query: 1441 SGALLKLSRGLFRLSELEKIASTYAAEHFSVDPLEVSLAFRVGLAQSLQLPGQPKHLNFA 1500
              AL+   R +FRL +LE+IA         VD +EV LA++  L +SL L      + F 
Sbjct: 609  LAALVATGREMFRLGKLEQIAREKVRTLALVDEIEVWLAYQNKLKKSLGLTSVTSEMRFF 668

Query: 1501 LFANVTNEGLEVAHSQVRTAELSPAFLRFITQLAFWRAHLKQQFPD 1546
              + VT   L+ A  QV+ AE S  F  +I Q       L+++ P+
Sbjct: 669  DVSGVTVTDLQDAELQVKAAEKS-EFREWILQWGPLHRVLERKAPE 713