Pairwise Alignments

Query, 318 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 307 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score = 67.4 bits (163), Expect = 4e-16
 Identities = 68/277 (24%), Positives = 115/277 (41%), Gaps = 16/277 (5%)

Query: 1   MHISSGRWVYGFLLTLLTALLWGILPIKLKQVLQVMDPITVTWFRLIVAGSCLFVYLALT 60
           MH SS R  Y  L  +   ++WG   +  + +   +DP+     R  +A   L  +L L 
Sbjct: 1   MHSSSDRITYMKLAAV--TMIWGGTFVAGRYLSGTVDPLLAASLRFALASLALLGFLGLA 58

Query: 61  KRLPRRSVLGPKGGWLVGMAVCGLVGNY---VLYLVGLKRLSPGTAQLVVQMGPIFLMIA 117
            R+P   +  P    L+ + + G  G +   + +  GL+ ++   A L+V + P  + +A
Sbjct: 59  -RIP---LARPSPRQLLQLGMLGFFGIFFYNLCFFYGLQSINASRASLIVALNPAVIGLA 114

Query: 118 SVFVFKERFSRGQVLGLFVLIAGFGLFFNQRLEELLTSLGAYTAGVLTILLATSIWVFYA 177
           S ++FKER     V G+ + + G  +    R   +L    +   G L I      W  Y+
Sbjct: 115 SRWLFKERLGASNVAGILLCLTGAAVVIVSRNPHVLNEATSSWRGDLLIFGCVVGWGIYS 174

Query: 178 LGQKQLLTVWNSLQVMMVIYLTCALLLT-----PWAHPLEALDLSPLQAWLLLAC--CMN 230
           L  + L      LQ +    L   L+LT          LEA+        L LA    + 
Sbjct: 175 LFSRGLNQSLGPLQTVTWSILLGTLMLTLTTLIMGRFTLEAMGRLQTAQGLSLAYLGVLG 234

Query: 231 TLVAYGAFAEALAHWEASRVSATLALTPLVTFVAVAL 267
           + +AY  + + +    A+R    +AL PL   +  AL
Sbjct: 235 SALAYIGYYDGIRRIGATRSGVFIALNPLTAVICGAL 271