Pairwise Alignments

Query, 318 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 311 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 62.8 bits (151), Expect = 1e-14
 Identities = 76/298 (25%), Positives = 122/298 (40%), Gaps = 21/298 (7%)

Query: 2   HISSGRWVYGFLLTLLTALLWGILPIKLKQVLQVMDPITVTWFRLIVAGSCLFVYLALTK 61
           H  +G W     L +   L+ G L I L++  Q   P+T  WFR       L  + A+T+
Sbjct: 20  HERAGMW-----LMVAGGLMLGTLGIFLEEAGQ--SPLTAVWFRCAFGLLALTAWFAVTR 72

Query: 62  RLPRRSVLGPKGGWLVGMAVCGLVGNYVLYLVGLKRLSPGTAQLVVQMGPIFLMIASVFV 121
           R     + G      V   V  ++ N+VL+   ++R S G A +VV + P  +M      
Sbjct: 73  RWKELRLTGAARLAAVSAGVLAVI-NWVLFFEAIERTSIGVATVVVHVQPFLVMAFGALW 131

Query: 122 FKERFSRGQVLGLFVLIAGFGLFFNQRLEELLTSLGAYTAGVLTILLATSIWVFYALGQK 181
           +KER +R Q       + G  L  +  ++  LT  G       T L    + +F ++G  
Sbjct: 132 WKERITRVQAAATLACLVGLAL-ASGWVDGALTGAGWSP----TYLWGIGLALFNSVGYA 186

Query: 182 QLLTVWNSLQVMMVIYLTC------ALLLTPWAHPLEALDLSPLQAWLLLACCMNTLVAY 235
            L  + N  + +  + L        A++L  W          P  AWL     ++T +AY
Sbjct: 187 ALTLIANRARGVTPLALAWWQCAVGAVVLVWWPFVHGWPPAGPAWAWLAGLGAIHTGLAY 246

Query: 236 GAFAEALAHWEASRVSATLALTPLVTFVAVALAAWLWPAYVQAEEINALGYAGALVVV 293
                 +A   A RV+    + P  + VAV  A +   A   ++ +  L    ALVVV
Sbjct: 247 VVLYAGVARLSAGRVAVLQFVYP-ASAVAVEWAVY-GRALSTSQLVGVLMMMVALVVV 302



 Score = 37.7 bits (86), Expect = 4e-07
 Identities = 31/144 (21%), Positives = 61/144 (42%), Gaps = 5/144 (3%)

Query: 5   SGRWVYGFLLTLLTALLWGILPIKLKQVLQVMDPITVTWFRLIVAGSCLFVYLALTKRLP 64
           S  +++G  L L  ++ +  L +   +   V  P+ + W++  V G+ + V+       P
Sbjct: 168 SPTYLWGIGLALFNSVGYAALTLIANRARGVT-PLALAWWQCAV-GAVVLVWWPFVHGWP 225

Query: 65  RRSVLGPKGGWLVGMAVCGLVGNYVLYLVGLKRLSPGTAQLVVQMGPIFLMIASVFVFKE 124
                GP   WL G+        YV+   G+ RLS G   ++  + P   +     V+  
Sbjct: 226 PA---GPAWAWLAGLGAIHTGLAYVVLYAGVARLSAGRVAVLQFVYPASAVAVEWAVYGR 282

Query: 125 RFSRGQVLGLFVLIAGFGLFFNQR 148
             S  Q++G+ +++    +   QR
Sbjct: 283 ALSTSQLVGVLMMMVALVVVGTQR 306