Pairwise Alignments

Query, 600 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 593 a.a., fused predicted multidrug transporter subunits of ABC superfamily: ATP-binding components (NCBI) from Escherichia coli BW25113

 Score =  229 bits (583), Expect = 3e-64
 Identities = 175/594 (29%), Positives = 292/594 (49%), Gaps = 42/594 (7%)

Query: 13  WAEIRRLALRH---KKSLWIANGVAVLATLCSVPIPLLLPLLVDEVLLGHGDAALNVMNH 69
           W  ++RL       +K L IA  +  +A    V  PLL+   +D ++  +        N 
Sbjct: 8   WPTLKRLLAYGSPWRKPLGIAVLMMWVAAAAEVSGPLLISYFIDNMVAKN--------NL 59

Query: 70  ALPLGWQKAAGYIGLMLLVTLFLRCGALVFNVVQARLFARLAKDIVYRIRVRLIERLKRI 129
            L +    AA Y+GL L         A   +  Q+ LF R A  +V ++R  +++   R 
Sbjct: 60  PLKVVAGLAAAYVGLQLF--------AAGLHYAQSLLFNRAAVGVVQQLRTDVMDAALRQ 111

Query: 130 SLGEYESLGSGTVTTHLVTDLDTL-DKFVGETLSRFLVAMLTLVGTSAILVW-MHWQLAL 187
            L E+++   G V + +  D + + D +V  T+   ++    LVG   + ++ + W++AL
Sbjct: 112 PLSEFDTQPVGQVISRVTNDTEVIRDLYV--TVVATVLRSAALVGAMLVAMFSLDWRMAL 169

Query: 188 LILLFNPLVIYATVQLGKRVKHLKKLENDSTSRFTQALTETLDAIQEVRAGNRQGFFLGR 247
           + ++  P+V+   V   +    + +      +       E ++ +  ++   +Q  F  R
Sbjct: 170 VAIMIFPVVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEIINGMSVIQQFRQQARFGER 229

Query: 248 LGQRAREVRDYAIHSQWKTDASSRASGLLFQFGIDIFRAAAM--LTVLFS-----DLSIG 300
           +G+ +R    Y    Q     + R  G L +  + +F +  +  L +LF       + +G
Sbjct: 230 MGEASRS--HYMARMQ-----TLRLDGFLLRPLLSLFSSLILCGLLMLFGFSASGTIEVG 282

Query: 301 QMLAVFSYLWFMIGPVEQLLNLQYAYYAAGGALTRINELLARADEPQYAGGEDPFVGRET 360
            + A  SYL  +  P+ +L   Q     A  A  R+ EL+      QY   + P    ++
Sbjct: 283 VLYAFISYLGRLNEPLIELTTQQAMLQQAVVAGERVFELMD-GPRQQYGNDDRPL---QS 338

Query: 361 VGIEVRGLNFGYGED-LVLDQLNLAIAPGEKVAIVGASGGGKSTLVQLLLGLYTPQAGTI 419
             IEV  ++F Y +D LVL  +NL++     VA+VG +G GKSTL  LL+G Y    G I
Sbjct: 339 GTIEVDNVSFAYRDDNLVLKNINLSVPSRNFVALVGHTGSGKSTLASLLMGYYPLTEGEI 398

Query: 420 RFGGATQQEIGLETIRENVAVVLQHPALFNDTVRANLTMGRERSDQACWQALEIAQLDAT 479
           R  G     +    +R+ VA+V Q P +  DT  AN+T+GR+ S++  WQALE  QL   
Sbjct: 399 RLDGRPLSSLSHSALRQGVAMVQQDPVVLADTFLANVTLGRDISEERVWQALETVQLAEL 458

Query: 480 VKSLPLGLDSVVGRSGVRFSGGQRQRLAIARMVLAEPKVVILDEATSALDAATEYNLHQA 539
            +S+  G+ + +G  G   S GQ+Q LA+AR+++  P+++ILDEAT+++D+ TE  +  A
Sbjct: 459 ARSMSDGIYTPLGEQGNNLSVGQKQLLALARVLVETPQILILDEATASIDSGTEQAIQHA 518

Query: 540 LARFLSGRTTLIIAHRLSAVKQADRVLVFDGGHIAEDGDHQQLIADGGLYAKLY 593
           LA      T ++IAHRLS +  AD +LV   G   E G HQQL+A  G Y ++Y
Sbjct: 519 LAAVREHTTLVVIAHRLSTIVDADTILVLHRGQAVEQGTHQQLLAAQGRYWQMY 572