Pairwise Alignments

Query, 820 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 637 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  219 bits (559), Expect = 3e-61
 Identities = 173/578 (29%), Positives = 272/578 (47%), Gaps = 30/578 (5%)

Query: 229 LLTQRHAFADALQQ----EKER---AQITLESIGDGVITTDVDGAITYMNPAAEALTHWN 281
           L+  R A A+ LQQ     +ER   A    +   +GV+ TD  G I ++N A   +T ++
Sbjct: 61  LICARFARANQLQQPLKENRERLRQAAAVFDCTREGVLVTDTKGLIVHVNRAFMEITGYS 120

Query: 282 SAQAQGL-PLAALFNLLDDNAQPDGFTLIEHIVKGQLSGGSEHSKTIQRLDGSTVSVTLV 340
                G  P          N     F  +E    G+ SG   + +    +     ++ ++
Sbjct: 121 REDVMGRQPSLFKSGRHSSNFYQQMFQSLERT--GEWSGEIWNRRKSGEIYPQWQTIRVI 178

Query: 341 GAPIRSTGKVTGAVLVLHDMTQERQYIANLSWQATHDALTGLANRREFEFRLEQVLHPTA 400
                  G+V+  V V  D++  +     L+  A HD LT L NR  F  R EQ L  +A
Sbjct: 179 HD---DQGQVSHYVAVFSDISAIKDSEHELAHLAHHDPLTDLPNRLLFTDRAEQAL-ASA 234

Query: 401 QQNGGRHALMFLDLDQFKLVNDTCGHAAGDELLRHICALLQSDLREGDTLARLGGDEFGI 460
           Q +    AL+ LDLD FK++ND+ GH  GD+LL+ +   L++    G TLARLGGDEF +
Sbjct: 235 QTHKRGCALLLLDLDHFKIINDSLGHNVGDQLLKLVGERLKALFGPGVTLARLGGDEFAV 294

Query: 461 LLENCP-----AAVAEKIAESLRHTVQNLHFVWKGRPFMTTVSIGLVHLGHTPTTLETSL 515
           L E+CP     A +A+++ ++++       F++ G     + SIG+        + E  L
Sbjct: 295 LAESCPQVAQAAGLAQRMLDAMKQP-----FIFDGHQLFISASIGISLFPSDALSAEQLL 349

Query: 516 RAADMACYMAKEKGRNRVQVYHADDSELSLRFGEMAWVQRLHMALEENRFCLYAQEISPL 575
           R AD A + AK  GR    +Y  + +  +    E+A    L  ALE+   C+Y Q +  L
Sbjct: 350 RNADSALFKAKSAGREGYALYTEELTAHAQNRVEIA--SELRRALEQQELCVYYQPVHDL 407

Query: 576 GQTNGGDGHIEILLRLHDEAGRIILPDSFIPAAERYGLMTSLDRWVVENVFKIINRCMQE 635
             +      +E L+R       ++ P  FIP AER GL+  +D WV+    +    C   
Sbjct: 408 NDSRLIG--VEALVRWQHPERGLVPPGEFIPIAERTGLIADIDAWVMNQACR--QMCDWL 463

Query: 636 RPGLPMAMCAINLSGITIGDDDFLGFLREKFHTYTIPPGMICFEITETSAIANLGSAIRF 695
             G P++  AIN+S       +    + +  H   + P  +  E+TE++ + +   A+  
Sbjct: 464 AQGTPLSFIAINVSSRLFARRELYEQVAQVLHDTGLDPAFLELEVTESAVMEDPEVALEQ 523

Query: 696 INELKALGCHFSLDDFCAGMSSFAYLKHLPVDFLKIDGSFVKDMLDDPINRAMVEVINHI 755
           ++ L+ LG   ++DDF  G SS   LK LPV  LKID  FV  +  D  + A+V V+  +
Sbjct: 524 LHRLRELGLRLAIDDFGTGYSSLLRLKRLPVQKLKIDQGFVAGLPWDEDDAAIVRVVIAL 583

Query: 756 GHVMGKRTIAEFVETPQIEQALLEIGVDYAQGYLIERP 793
              MG +  AE +E  +  + LL+   D  QGY   RP
Sbjct: 584 AKSMGMQVHAEGIEQREQARFLLDQQCDLGQGYWFGRP 621