Pairwise Alignments

Query, 298 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 296 a.a., hca operon transcriptional regulator from Escherichia coli BL21

 Score =  105 bits (261), Expect = 2e-27
 Identities = 89/300 (29%), Positives = 139/300 (46%), Gaps = 14/300 (4%)

Query: 1   MNLRTLRAFVEVVRQGGFSQAAEVVSLTQSSVSKAVKTLEDELGTPLLNRLGHRNELTAA 60
           M LR LR FV V +   F++AAE +  +Q S+S  ++ LE+ +G PLL R   +  LTAA
Sbjct: 1   MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAA 60

Query: 61  GEIAYRRALVLLAERNDLVAEINDLRGLK----RGVLRIGLPPVGCGVLFATMFATYRSR 116
           GE   + AL +L +     AE   LR  K       L IG  P     L   +   +R R
Sbjct: 61  GECFLQDALAILEQ-----AENAKLRARKIVQEDRQLTIGFVPSAEVNLLPKVLPMFRLR 115

Query: 117 YPDIDIELTEYGSKKLRECLEAGEVDLAALLLPV-DEDFDYQPVRNEPLMAVLPMSHPLA 175
            PD  IEL    + +  E +  GE+D+  +  PV   + DY  + +EPL+ VLP+ HPLA
Sbjct: 116 QPDTLIELVSLITTQQEEKIRRGELDVGLMRHPVYSPEIDYLELFDEPLVVVLPVDHPLA 175

Query: 176 HLKRIDFTHLADSPFILFEAGF--ALNAKILAACERKGVTPKVTARSGQIDFIIDLVAAG 233
           H K I    L    F+  +  +  +L   + A   ++   P +   +  I   ++LV  G
Sbjct: 176 HEKEITAAQLDGVNFVSTDPAYSGSLAPIVKAWFAQENSQPNIVQVATNILVTMNLVGMG 235

Query: 234 LGVAFVPRMLAYKHQHAGIALIPLDEPHTDWHIALAWRTSAHLPPAALAWLELAREHAVS 293
           LGV  +P  +        +   P+        + +AW+    + PA   ++ + +E   S
Sbjct: 236 LGVTLIPGYM-NNFNTGQVVFRPIAGNVPSIALLMAWK-KGEMKPALRDFIAIVQERLAS 293