Pairwise Alignments

Query, 281 a.a., poly(3-hydroxyalkanoate) depolymerase from Pseudomonas simiae WCS417

Subject, 300 a.a., cultivar specificity protein W78 from Agrobacterium fabrum C58

 Score = 70.9 bits (172), Expect = 3e-17
 Identities = 74/260 (28%), Positives = 110/260 (42%), Gaps = 11/260 (4%)

Query: 17  LRTAVRPGKPHL-TPLLIFNGIGANLELVFP-FVQALDPDLEVIAFDVPGVGGSSTPKRP 74
           +R A R   PH  TPL++ N  GA L+   P  V  L     ++  D  G+G S     P
Sbjct: 40  IRFAYRELGPHGGTPLVLLNHWGAVLDNFDPRIVDGLASSHHIVVLDYRGIGLSGGTA-P 98

Query: 75  YRFPGLAKLTARMLDYLDYGQVNAVGVSWGGALAQQFAYDYPERCKKLILAATA-AGAFM 133
                +A+    ++  L +  V+ +G S GG +AQ  A   P+  +KLIL  T  AG   
Sbjct: 99  VTIDEMARDVIAVIGKLGFSTVDLMGFSLGGFVAQDIALKTPDLVRKLILTGTGPAGGAG 158

Query: 134 VPGKPKVLW--LMASPRRYIQPSHVVRIAPMIYGGSFRRD--SNLAAEHASKVRSAGKLG 189
           +     V W  ++        P   +       G    +D  + L      + + A    
Sbjct: 159 IERVGAVSWPLILKGILTLRDPKTYLFFTSTTNGRRAAKDFLARLKERKMGRDKGATPYA 218

Query: 190 YYWQLFAGLGW--TSIHWLHKIRQPTLVLAGDDDPLIPLINMRMLAWRIPNAQLHIIDD- 246
           +  QL A   W   +   L +I  P LV  GD+D ++P  N R +A RIPNA+L I +D 
Sbjct: 219 FLRQLAAIKAWGRQAPQDLGRIHIPVLVANGDNDIMVPTSNSRDIARRIPNAELVIYEDA 278

Query: 247 GHLFLITRAEAVAPIIMKFL 266
           GH  +        P  + FL
Sbjct: 279 GHGGIFQYHAEFVPKALAFL 298