Pairwise Alignments

Query, 405 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 391 a.a., putative inner membrane transport protein from Pseudomonas putida KT2440

 Score =  158 bits (399), Expect = 3e-43
 Identities = 116/387 (29%), Positives = 196/387 (50%), Gaps = 11/387 (2%)

Query: 19  LLALAMTGFICIVTETLPAGLLPLISEGLAISPSMAGQMVTAYALGSVLAVIPMTIATRG 78
           L+ALA+  F   VTE  P G+LP I+  L +S   AG +V+AYA+G ++    MT+AT  
Sbjct: 7   LVALAIGAFGIGVTEFAPMGMLPSIATDLGVSIPAAGLLVSAYAIGVLIGAPLMTLATVK 66

Query: 79  WRRRNVLLLTIVGFLLFNSITAWSSHYGVTLVARFFAGVAAGLAWSLLAGYARRMVAPHQ 138
             RR +L+  +  F L N ++A +S Y   LVAR    +  G  + + +  A  +V P +
Sbjct: 67  IPRRYLLIGLMAIFTLGNLMSALASDYASLLVARVVTSLNHGAFFGIGSIVAASVVPPEK 126

Query: 139 QGRALALAMVGTPIALSLGVPLGTWLGGLVGWRTTFGLMSAVSLVLIVWVLVKVPDYAPQ 198
           +  A+A   +G  +A   GVPL TWLG ++GWRT F  ++ + LV +  +   +P+ A  
Sbjct: 127 RAGAVAAMFMGLTLATIGGVPLATWLGEMLGWRTAFWGIAGLGLVAMTTLWYALPNVASP 186

Query: 199 PTHQRLSLGKVLTTPGVRPVLAVVISWMLAHNIL---YTYIAPFVAPAGLADR--VDLVL 253
                ++  +VL   G RPVLA ++  ++  + +   +TYIAP +     A    V  +L
Sbjct: 187 KGEGAMAEIRVL---GRRPVLAALLLTVVGSSAMFTVFTYIAPILQHEAAASTPFVTAML 243

Query: 254 LVFGVAALAGIWLTAKWVEPLLRRTVLVSLVAFAAMSAVFGLLGNVPVVIYFGVAVWGLS 313
           ++FGV    G     K  +  + RT+++SL    A+  VF L+ + P+     + VWG +
Sbjct: 244 VLFGVGLTLGNVWGGKAADRSIDRTLILSLAGLIAVLLVFPLVLDWPLPTALAILVWGAA 303

Query: 314 FGGAATLLQTALADAAGDGADVALSLNVVAWNSAIAGSGVVGGVLLDT---WGVASFPWA 370
                  LQ  + +AA D  ++A ++N+ A+N   A    +GG +++    +   S   A
Sbjct: 304 SFALVPPLQMRVMEAAKDAPNLASAVNIGAFNLGNAIGAALGGAVINAGLGYPAISLAGA 363

Query: 371 MLVLIGVSLAIAWGASAHGFKPGARDA 397
            +  +G+ L + +     G   G + A
Sbjct: 364 AMAALGLVLVLLFAWRGRGVVAGGQVA 390