Pairwise Alignments

Query, 403 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 404 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  634 bits (1634), Expect = 0.0
 Identities = 317/404 (78%), Positives = 345/404 (85%), Gaps = 1/404 (0%)

Query: 1   MSTSLPLTPARRPL-APLVAFIILVLGALFLQNSVGSRQVLLLVVGAALGLTLYHAAFGF 59
           M  S   TP  R L APL+A  +++  A FL  + G +QV+LL+VG ALGLTLYHAAFGF
Sbjct: 1   MGLSATATPEPRRLGAPLIALTLMLASAWFLNLNAGFKQVVLLLVGTALGLTLYHAAFGF 60

Query: 60  TSAWRVFINDRRGAGLRAQMVMLAIAVLLFFPALGAGSLFGQPVVGLVAPAGLSVVFGAF 119
           TSAWRVFIN+RRGAGLRAQMVML +AVLLFFPAL AGSLFG PV GLVAPAG+SVVFGAF
Sbjct: 61  TSAWRVFINERRGAGLRAQMVMLTLAVLLFFPALSAGSLFGNPVTGLVAPAGVSVVFGAF 120

Query: 120 IFGIGMQLGGGCASGTLFTVGGGNARMLVTLFFFICGSLIATHHVDWWFALPSFPAVSIV 179
           IFGIGMQLGGGCASGTLFTVGGGNARMLVTL FF+ GS+ ATHH DWWFALPS PA SIV
Sbjct: 121 IFGIGMQLGGGCASGTLFTVGGGNARMLVTLLFFVIGSVSATHHADWWFALPSLPATSIV 180

Query: 180 KSFGVVPAMGLSLAVFAIIALVTVRLEKGRHGQLEEGVKSEHQGLHRFLRGPWPLVWGAI 239
           + +G+ PA+  SLAVF +IA  TV LEK RHG LE    SEHQGL RFLRGPWPL+WGAI
Sbjct: 181 QVWGIGPAVLASLAVFGLIAWATVVLEKRRHGALEALPASEHQGLRRFLRGPWPLLWGAI 240

Query: 240 GLALLNYATLALAGRPWGITSAFALWGAKVASGLGVDVASWAFWQMPGNAKALAAPVWED 299
            LALLNYATLALAGRPWGITSAFALWGAKV SGLGVDV SW FWQ P NAKALAAP+W+D
Sbjct: 241 ALALLNYATLALAGRPWGITSAFALWGAKVLSGLGVDVGSWVFWQAPANAKALAAPLWQD 300

Query: 300 ITSVMDIGIVLGALLAAGLAGRFAPSLKIPTRSLVAAVIGGLLLGYGSRLAYGCNIGAYF 359
           IT+VMD+GIVLGALLAAGLAGRFAP+LKIP  SLVAAVIGGLLLGYGSRLAYGCNIGAYF
Sbjct: 301 ITTVMDLGIVLGALLAAGLAGRFAPNLKIPLPSLVAAVIGGLLLGYGSRLAYGCNIGAYF 360

Query: 360 SGIASGSLHGWVWLVAAFIGNSVGVRLRPLFFAGERPQVALSGC 403
           SGIASGSLHGW+WLVAA+ GN +GVRLRPLFF GER    L+GC
Sbjct: 361 SGIASGSLHGWLWLVAAYTGNLIGVRLRPLFFVGERRPTMLTGC 404