Pairwise Alignments

Query, 298 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 306 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  149 bits (376), Expect = 8e-41
 Identities = 106/302 (35%), Positives = 153/302 (50%), Gaps = 15/302 (4%)

Query: 1   MSRDLPPLNALRAFEATARLNSVSQAAEQLHVTHGAVSRQLKVLEEHLGISLFVKDGRGL 60
           MSR LPPL ALRAFEA +R NS ++AAE+L +T  AVSR ++ LEEH    LF + GR L
Sbjct: 1   MSRRLPPLYALRAFEAASRHNSFTRAAEELSITQSAVSRHIRTLEEHFACRLFQRSGRTL 60

Query: 61  KLTDAGVRLRDASAEAFERLRDVCAELTQASADAPFVLGCSGSLLARWLIPRLGRLNADL 120
           +LT+A   L     E F  L   C  L   + D    +    +L  RWL+ RL R  A  
Sbjct: 61  QLTEAARLLLPGVREGFAALERACHTLN--AEDDILRMKAPSTLTMRWLLARLSRFRALQ 118

Query: 121 PDLRLHLSA---GDGDLDPRRPGLDALLVFAEPPWPADMQVYELASERIGPVMSPRFAGY 177
           P   + L++      ++D  +   D  ++ +   +PAD +   L  E + PV +P     
Sbjct: 119 PGNEVQLTSAWMSVDEVDFNQEPFDCAVLLSYGHFPADWEASYLFPELLIPVGAPNL--- 175

Query: 178 AHLRDAP--AEALCGEKLLHTTSRPQAWPSWAAQHGIEPG-ALKHGQGFEHLYYLLEAAV 234
             L D P   E L   +LLH T   + W +W  + G+    +LK GQ F+ L   + AA 
Sbjct: 176 --LEDGPWDVERLATAELLHPTPDRRDWRNWLERMGLSSQVSLKGGQVFDTLELGMIAAA 233

Query: 235 AGLGVAIAPQPLVAEDVRAGRLVAPW--GFSETPAQLALWLPKRAADGRAGQLAQWLKAE 292
            G GV++    +VAEDV  GRL  PW    +   +   +W   R    R  +LA++L+AE
Sbjct: 234 RGYGVSMGDLLMVAEDVAQGRLSLPWPTAVASGESYYLVWPKTRPGGERLRRLAEFLQAE 293

Query: 293 LQ 294
           ++
Sbjct: 294 VK 295