Pairwise Alignments

Query, 298 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 298 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  122 bits (305), Expect = 1e-32
 Identities = 89/275 (32%), Positives = 130/275 (47%), Gaps = 29/275 (10%)

Query: 1   MSRDLPP-LNALRAFEATARLNSVSQAAEQLHVTHGAVSRQLKVLEEHLGISLFVKDGRG 59
           MS+ L P + AL+ FEA AR  S ++AAE+LH+T  AVS+Q+  LEE L  +LF +  + 
Sbjct: 1   MSKRLTPSMTALQCFEAAARHLSFTRAAEELHLTQSAVSKQVAQLEEMLCHNLFERVRQR 60

Query: 60  LKLTDAGVRLRDASAEAFERLRDVCAELTQASADAPFVLGCSGSLLA-----------RW 108
           L L+ AG             L +V   LTQ    + ++L   G               RW
Sbjct: 61  LYLSPAGSLY----------LAEVHKILTQVDISSRYILTYGGETEVLRIATQPTFGDRW 110

Query: 109 LIPRLGRLNADLPDLRLHLSAGDGDLDPRRPGLDALLVFAEPPWPADMQVYELASERIGP 168
           L+P+L    A  P++ L +       D  +   D    F +  WP    + EL  E + P
Sbjct: 111 LVPKLKDFAALHPNIHLDVRNELEPFDVLQAKADIAFFFGQGSWPGATCI-ELFREAVVP 169

Query: 169 VMSPRFAGYAHLRDAPAEALCGEKLLHTTSRPQAWPSWAAQHGIEPGALKHGQGFEHLYY 228
           V +P F          + A     LL  TSRP+AW  W  + G+      HG  F+  Y 
Sbjct: 170 VCAPGFVAEG------SHASSRHTLLQCTSRPEAWHEWFLEQGLHSQNSYHGPRFDTFYM 223

Query: 229 LLEAAVAGLGVAIAPQPLVAEDVRAGRLVAPWGFS 263
            + AA +G GVA+ PQ LVA+++  G L+ PW ++
Sbjct: 224 CIRAAQSGYGVALVPQYLVADELAQGSLMIPWDYA 258