Pairwise Alignments

Query, 298 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 308 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

 Score =  143 bits (360), Expect = 6e-39
 Identities = 98/290 (33%), Positives = 144/290 (49%), Gaps = 8/290 (2%)

Query: 3   RDLPPLNALRAFEATARLNSVSQAAEQLHVTHGAVSRQLKVLEEHLGISLFVKDGRGLKL 62
           R LP L+ L AFEA +R  SV+ AA +L +T GAVSRQ+  LEE LG++LF+++ + ++L
Sbjct: 7   RFLPSLSLLAAFEAASRTGSVTAAARELGLTQGAVSRQILALEEQLGVALFLRERQTIRL 66

Query: 63  TDAGVRLRDASAEAFERLRDVCAELTQASADAPFVLGCSGSLLARWLIPRLGRLNADLPD 122
           T AG        EA  R+      L          LG   S   RWL+PRL    A  P 
Sbjct: 67  TRAGEGYAREIREALRRISTASLNLRANPDGGTLNLGVLPSFGTRWLVPRLPDFIARHPG 126

Query: 123 LRLHLSAGDGDLDPRRPGLDALLVFAEPPWPADMQVYELASERIGPVMSPRFAGYAHLRD 182
           + ++L       D R   +DA + F  P WP     + L  E++ PV SP F     L  
Sbjct: 127 ISVNLLTRSSLFDFRTDTVDAAIHFGLPHWPGTELAF-LMHEKVIPVCSPAFKELYGL-- 183

Query: 183 APAEALCGEKLLHTTSRPQAWPSWAAQHGIEPGALKHGQGFEHLYYLLEAAVAGLGVAIA 242
           +  + L    LLH T+RP AW  W   H +    + HG  F+    + EA+ AG+G ++ 
Sbjct: 184 SRPDDLLHVPLLHMTTRPDAWEQWFRSHDVRFDNV-HGMLFDQFTTIAEASSAGVGASLV 242

Query: 243 PQPLVAEDVRAGRLVAPWGFSETPAQLALWL---PKRAADGRAGQLAQWL 289
           P  ++ E++R+GRLV+     E  ++ A +L   P RA         +W+
Sbjct: 243 PSFMIEEELRSGRLVSAVA-GEVESEEAYYLACMPDRATYPPLESFRRWI 291