Pairwise Alignments

Query, 276 a.a., flagellar motor switch protein FliY from Pseudomonas simiae WCS417

Subject, 273 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 83.6 bits (205), Expect = 4e-21
 Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 12/265 (4%)

Query: 5   RKSIRPLAVCLLGAAVAMTSLAASAFQQDGKIIAGSDVTFFPYEYMD--NNKPAGFDIEF 62
           +K   P  +  L A+ A+ +   +A +  G+I A     + P ++ D   N   GFD + 
Sbjct: 2   KKLFIPTLLAGLLASSAVFAALPAAIKDKGEISAAIVPNYPPMDFKDPATNTLTGFDFDL 61

Query: 63  MDGLGKVMGRKVETLDTRFPNLITGLQAGRFDVTNSSMYITAERVKVIDMIPYLKSGESI 122
            + L + +G K++  +T F  +++GL   R D+  S M  TAER K +  I Y  SG  +
Sbjct: 62  GNALAERLGVKIKWQETGFEQMLSGLTTKRVDIVLSGMTDTAERQKSVTFIDYFSSGPQL 121

Query: 123 LTLKDSSFQPKTPEEFCGHKIGSMGATSWLAQMNKLSTEYCVAKGLKPIQI--SEYSTD- 179
            T+       K   + CG K+G+   T+W +++   S E C A G   I +  +E S D 
Sbjct: 122 YTMAKRE-DLKELTDLCGKKVGTSRRTTWPSEIAAWSKENCEAAGKPAIVVIGTEGSADA 180

Query: 180 -PQTTQALLAHAVEAQITDAAVARGVIDKLGSRVVISSDTLIYPVLNGFGVKKGNDTVKK 238
             Q  Q  L  A++   T   +    +DK   + V      I     G G++K N  +  
Sbjct: 181 RAQLQQNRLDAAMQGSETIPYLMS--LDKGKYKPV---GLAISKQFTGLGIEKSNTQLVT 235

Query: 239 ALLDGLEKYRATSEYAALLKKYNFQ 263
           A+ + L+       Y  +LKK++ +
Sbjct: 236 AISEALQGMIDDGTYGKILKKWDLE 260