Pairwise Alignments

Query, 276 a.a., flagellar motor switch protein FliY from Pseudomonas simiae WCS417

Subject, 268 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 64.3 bits (155), Expect = 3e-15
 Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 3/214 (1%)

Query: 54  KPAGFDIEFMDGLGKVMGRK-VETLDTRFPNLITGLQAGRFDVTNSSMYITAERVKVIDM 112
           KP G  ++    + K +G K V+     F  L+  L A + D+    ++   ER +VID+
Sbjct: 55  KPRGLTVDLGLEVAKRLGDKQVQWRVIPFSGLVPALLAQQCDMIVDQLFDKPERRQVIDI 114

Query: 113 IPYLKSGESILTLKDSSFQPKTPEEFCGHKIGSMGATSWLAQMNKLSTEYCVAKGLKPIQ 172
           + Y+ S +S++  K +    K  ++  GHK+  +   S +  +     +     G  P++
Sbjct: 115 VNYMYSSQSVVVPKGNPKGIKALDDLSGHKVAVLNG-STIKTLLDAQNDSLTKAGKPPMK 173

Query: 173 ISEYSTDPQTTQALLAHAVEAQITDAAVARGVIDKLGSRVVISSDTLIYPVLNGFGVKKG 232
           +  Y++D    QAL    V+A  T    A G    +   +          +L G G++K 
Sbjct: 174 LVVYNSDTDAFQALRISQVDAYGTTVETA-GYYAAMAPDLFQEGVPAFSRILTGLGMRKD 232

Query: 233 NDTVKKALLDGLEKYRATSEYAALLKKYNFQAPT 266
           +  +  A+   +   R+   Y ALL K++  + T
Sbjct: 233 DPQLSAAVQQVISDMRSDGSYVALLNKWHVSSDT 266