Pairwise Alignments

Query, 276 a.a., flagellar motor switch protein FliY from Pseudomonas simiae WCS417

Subject, 266 a.a., Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

 Score = 64.7 bits (156), Expect = 2e-15
 Identities = 52/222 (23%), Positives = 107/222 (48%), Gaps = 14/222 (6%)

Query: 18  AAVAMTSLAASAFQ---QDGKIIAGSDVTFFPYEYMDNN-KPAGFDIEFMDGLGKVMGRK 73
           A VA+T+  A A     + G +  G D T+ P++  +   +  GF+++ +  + K MG K
Sbjct: 15  ALVAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFEVDILKAMAKSMGVK 74

Query: 74  VETLDTRFPNLITGLQAGRFDVTNSSMYITAER-VKVIDMIPYLKSGESILTLKDSSFQP 132
            E + T +  +I  L   +FD+  S M +T ER +++    P++  G+++L  K+ + + 
Sbjct: 75  FEAVSTAYDGIIPALLTDKFDMIGSGMTLTQERNLRLNFSEPFIVVGQTLLIRKELAGEI 134

Query: 133 KTPEEFCGHKIGSMGATSWLAQMNKLSTEYCVAKGLKPIQISEYSTDPQTTQALLAHAVE 192
           K+ ++    K      TS L    ++ ++  ++K     +   Y  + +    ++    +
Sbjct: 135 KSYKDLNNEK---YRLTSKLGTTGEMVSKKLISKA----KYHGYDNEQEAVMDVVNGKAD 187

Query: 193 AQITDAAVARGVIDKLGS-RVVISSDTLIYPVLNGFGVKKGN 233
           A + DA      +DK G+ +++   +   Y  L  FG+KKG+
Sbjct: 188 AFVYDAPYNVVAVDKAGAGKLLFLDEPFTYEPL-AFGLKKGD 228