Pairwise Alignments

Query, 276 a.a., flagellar motor switch protein FliY from Pseudomonas simiae WCS417

Subject, 264 a.a., periplasmic cystine-binding protein from Pseudomonas putida KT2440

 Score = 74.3 bits (181), Expect = 3e-18
 Identities = 69/268 (25%), Positives = 117/268 (43%), Gaps = 19/268 (7%)

Query: 1   MTAFRKSIRPLAVCLL-GAAVAMTSLAAS---AFQQDGKIIAGSDVTFFPYEYMDNN-KP 55
           M+ F K +   ++ LL GA +   + A       Q+ G I  G + T+ P+ + D N K 
Sbjct: 1   MSKFAKPLLNASLALLLGAGLLSQAFAGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKL 60

Query: 56  AGFDIEFMDGLGKVMGRKVETLDTRFPNLITGLQAGRFDVTNSSMYITAERVKVIDMI-P 114
            GF++E  + L K +G K +   T++  ++  L++ R DV  + + I+ ER K  D   P
Sbjct: 61  TGFEVELSELLAKELGVKAKIQPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSEP 120

Query: 115 YLKSGESILTLKDSSFQ--PKTPEEFCGHKIGSMGATSWLAQMNKLSTEYCVAKGLKPIQ 172
           Y  SG   L LK  + Q   K  ++  G K+G    T++         E  V K +    
Sbjct: 121 YTVSGIQALILKKKAEQLNIKGAQDLAGKKVGVGLGTNY---------EQWVKKDVPQAD 171

Query: 173 ISEYSTDPQTTQALLAHAVEAQITDAAVARGVIDKLGSRVVISSDTLIYPVLNGFGVKKG 232
           +  Y  DP     L    ++A + D   A     K      ++ D     + +G  ++KG
Sbjct: 172 VRTYEDDPSKFADLRNGRIDAILIDRLAALEYAQK-AKDTELAGDA-FSRLESGVALRKG 229

Query: 233 NDTVKKALLDGLEKYRATSEYAALLKKY 260
              +  A+   ++K +A    A L +KY
Sbjct: 230 EPELLAAINKAIDKLKADGTLAKLSEKY 257