Pairwise Alignments

Query, 385 a.a., acetylornithine deacetylase from Pseudomonas simiae WCS417

Subject, 393 a.a., N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) from Variovorax sp. SCN45

 Score = 84.7 bits (208), Expect = 4e-21
 Identities = 91/359 (25%), Positives = 142/359 (39%), Gaps = 57/359 (15%)

Query: 51  NLLATIGPAEVPG----IVLSGHTDVVPVEG-QRWSVAPFDLTEKDGKLYGRGTADMKGY 105
           NL A   PA+       +V +GHTDVVP    ++W+  PF  T +DGKLYGRG  DMK  
Sbjct: 53  NLWAVRRPADAAATTRTLVFAGHTDVVPTGPVEQWTSHPFTPTHRDGKLYGRGACDMKTS 112

Query: 106 IACVLACVPALVKA--SLRMPVHIALSYDEE-VGCLGVRSLIERFHEQPVKPLLCVIGEP 162
           +A  +  +   ++A    R+ + + L+ DEE  G  G   +      +      C++GEP
Sbjct: 113 VAAFVTSIEDFLQAVPEPRLTLALLLTSDEEGPGVDGTVVVCNTLAARGEVIDYCIVGEP 172

Query: 163 TELKPV-----LGHKGKLAMRCHVHGAACHSAYAPAGVNAIEYAACLISELVRLGETLKA 217
           T ++        G +G ++ +  V G   H AY     N +   A  ++ELV     + A
Sbjct: 173 TAVERCGDMIKNGRRGTMSGKLTVKGVQGHIAYPHLAKNPVHSVAPALAELV----AINA 228

Query: 218 PQHLDQRFAPAFSTVQTGLIN---GGKALNIVPQDCSFDFEVRSLPAQDPWQVARQLQA- 273
               D    P F      + N   G  A N++P     DF  R      P  + +++ A 
Sbjct: 229 AGGWDAASNPYFQPTSWQISNFHSGTGASNVIPGSAVIDFNFRFSTESTPESLQQRVHAV 288

Query: 274 ----YAEQTL------LPAMRAVSEQSAISLSELSSYPGLATSLESQA----AEWVAQFC 319
                 + TL      LP +    E        +    G+ T L +      A ++A+ C
Sbjct: 289 LDAHQVDYTLAWTIGGLPFLTTPGELVTAVQGAIRDETGIETELSTSGGTSDARFIAKIC 348

Query: 320 GSREFATVAFGTEGGLFDQAGIPTVVCGPGSMEQGHKPDEFISVAQLQACDRMLARVLE 378
                                   V  GP +    HK DE I VA+++    +  R L+
Sbjct: 349 RQ---------------------VVELGPVNASI-HKIDEHIDVAEIETLKNIYVRTLK 385