Pairwise Alignments

Query, 307 a.a., alkanesulfonate transporter from Pseudomonas simiae WCS417

Subject, 336 a.a., Taurine ABC transporter, substrate-binding protein TauA from Variovorax sp. SCN45

 Score = 95.9 bits (237), Expect = 1e-24
 Identities = 88/291 (30%), Positives = 133/291 (45%), Gaps = 21/291 (7%)

Query: 8   LSLLGLASLALSGTSAGAA----EPLTLTVGDQFFSNRIVLELSGEL-KDLPYKIDFKRF 62
           LSL   A+LA + T +GA     + +T    D     R+V+E SGE+ K   YKI+++ F
Sbjct: 7   LSLQCAAALATAFTLSGAVFAQTKEVTFAHQDMLVPLRLVME-SGEVEKATGYKINWRMF 65

Query: 63  NTGSPVASAVASGALDVGIVGDTPVISLAANGAPVKVVASTQTSLDGVGIVARKG--IHS 120
             G  V  A+ASG + +G  G +P+ + A+ G  +K+   +    +   +VAR G  I+S
Sbjct: 66  AGGGDVIRAMASGDVQMGETGSSPLTAAASQGQDIKLFWISADIANAEALVARNGTNINS 125

Query: 121 VADLRGKTVAIWNGSWSQQLAYKALDEAGVPRSSVNFKYLLPAEASLALTQGDIDAFGTW 180
           + DL GK VA    S +       +   GV   SVN   + P E + A  +GDIDA   W
Sbjct: 126 IKDLAGKKVATPFVSTAHYQLMAGMKMDGVDAKSVNVMNMRPPEIAAAWERGDIDATFIW 185

Query: 181 EPYVSLQEKEGSTLIRNAK-GLMSAPTY--IVAYEPALAQKSAIIKDFIARLTRARQWSN 237
           +P +S  +  G T+  +   G   APT+  IV      A     +  F+  L RA    N
Sbjct: 186 DPVLSKIKANGKTIATSGSIGKRGAPTFEGIVVNAKWAAANEPFMVAFVKALNRA----N 241

Query: 238 THVDEYAEAWSKANQSAPEIAKVWFKRD-----AIKVLPISPTIISEAQAT 283
                  ++W+  +     +AK W K D     A   L   PT+  +   T
Sbjct: 242 EEYKATGKSWTPDSPQTKAMAK-WTKADPKDVGAAMALYTFPTMAEQVSPT 291