Pairwise Alignments

Query, 307 a.a., alkanesulfonate transporter from Pseudomonas simiae WCS417

Subject, 318 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score = 85.1 bits (209), Expect = 2e-21
 Identities = 78/306 (25%), Positives = 133/306 (43%), Gaps = 16/306 (5%)

Query: 8   LSLLGLASLALSGTSAGAAEPLTLTVGDQFFSNRIVL-----ELSGELKDLPYKIDFKRF 62
           L  LGLA LA +   + A+   TL +G Q  S  + L      L   L+    ++ +  F
Sbjct: 6   LRQLGLALLASALLPSLASAEQTLRIGYQKSSTLLTLLKARGTLEQRLQAEGIRVTWHEF 65

Query: 63  NTGSPVASAVASGALDVGI-VGDTPVISLAANGAPVKVVASTQTSLDGVGIV--ARKGIH 119
            +G P+  A+  G +D+   V DT  +   A GA +   A    S     I+  A   + 
Sbjct: 66  PSGLPLLEALNLGNVDLSADVADTVPVFTQAAGAKLTYFAREAPSPTAQAILVPADSPLK 125

Query: 120 SVADLRGKTVAIWNGSWSQQLAYKALDEAGVPRSSVNFKYLLPAEASLALTQGDIDAFGT 179
           ++ADL+GK VA+   + S  L  +AL +AG+    +   YL+PA+   A     +DA+ T
Sbjct: 126 TLADLKGKRVAVTKAAGSHYLLIQALAKAGLTFKDITPAYLIPADGRAAFENHKVDAWVT 185

Query: 180 WEPYV-SLQEKEGSTLIRNAKGLMSAPTYIVAYEPALAQKSAIIKDFIARLTRARQWSNT 238
           W+PYV S Q ++ + ++ +   L S   Y +A          +++     L  A  W+  
Sbjct: 186 WDPYVASAQRQQNARILVDGSELASYQRYYLAGSDYAKAHPEVLQQVYLALREAGAWTKA 245

Query: 239 HVDEYAE----AWSKANQSAPEIAKVWFKRDAIKVLPISPTIISEAQATADFLVDAQMLK 294
           + +  A      W   + +  + A     R +  V P+    ++E Q  AD      +L 
Sbjct: 246 NPEAAARILGPLWGNLDSATVQQANA---RRSYDVQPVKLDNLAEQQRIADAFYREGLLP 302

Query: 295 QRYDVA 300
           +  D +
Sbjct: 303 KAVDTS 308