Pairwise Alignments

Query, 307 a.a., alkanesulfonate transporter from Pseudomonas simiae WCS417

Subject, 312 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score =  260 bits (664), Expect = 3e-74
 Identities = 133/297 (44%), Positives = 195/297 (65%), Gaps = 6/297 (2%)

Query: 13  LASLALSGTSAGAAEPLTLTVGDQFFSNRIVLELSGELKDLPYKIDFKRFNTGSPVASAV 72
           LA+  L+ T + AA   TL VGDQ ++ R V+E +G L+ LPY +++K+F  GSPVA A+
Sbjct: 7   LAATVLATTFSLAAAAQTLVVGDQSYNARAVMEAAGVLEQLPYTLEWKQFTAGSPVAEAL 66

Query: 73  ASGALDVGIVGDTPVISLAANGAPVKVVASTQTSLDGVGIVARKG--IHSVADLRGKTVA 130
             G+LD+G++GD P + L A GAP+KV+A ++ +L+GV I+ARK   IHS+ DLRGK  A
Sbjct: 67  NVGSLDIGLLGDAPPLFLGALGAPIKVIAVSRQNLEGVAILARKDSPIHSLQDLRGKRAA 126

Query: 131 IWNGSWSQQLAYKALDEAGVPRSSVNFKYLLPAEASLALTQGDIDAFGTWEPYVSLQEKE 190
           IW GSWSQQL + ALD+AGVPR +V  +YL   +AS AL  G +D   TWEPYV+ QE++
Sbjct: 127 IWKGSWSQQLLFSALDKAGVPRDAVELRYLSALDASHALDGGSVDVIATWEPYVTQQERQ 186

Query: 191 GSTLIRNAKGLMSAPTYIVAYEPALAQKSAIIKDFIARLTRARQW---SNTHVDEYAEAW 247
           G+ ++  A G++ A +++VA   A+  K A I DF+ RL +AR W   +  + + YA+AW
Sbjct: 187 GARVLATADGVIPAQSFVVANSKAVELKRAQIADFLQRLKKARDWTLSAPANTEAYADAW 246

Query: 248 SKANQSAPEIAKVWFKRDAIKVLPISPTIISEAQATADFLVDAQMLKQRYDVAPLFD 304
           +K  ++  +IA+ WF R    + P+ P +I++AQ T DF     ++K  Y    LFD
Sbjct: 247 AKLTRADRDIARAWFARARTDLAPLDPQVIADAQKTVDFFSGLGLIK-AYPAQSLFD 302